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berkeley_reactor_200306_planktonic_scaffold_295472_76

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(91197..93221)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCY6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 662.0
  • Bit_score: 638
  • Evalue 6.20e-180
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEF62332.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 662.0
  • Bit_score: 638
  • Evalue 8.70e-180
efflux transporter, RND family, MFP subunit, relted to HlyD similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 365.0
  • Bit_score: 219
  • Evalue 1.50e-54

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2025
ATGCGAATGCTCAGTAACGGTTGGAAATTCATCCGGCGCCAGCCACGCTGGCGGTTGATCGTGGCGGGCGCGGTTGTTCTCGTCCTGGGCGGTTGGGGGCTGACGCGCGGCGGCGGTTCGGCGGCAAAGATTCCGACGTTCACGGCGCGGCGCGGGCCGCTGGAAATCAACGTCATGGAAGGCGGCAGTTTGCAGGCGCAGGAATCGCAGCAGGTGAAATGCGAGGTGCGCGTGGGTTATCAGGGAACGAAGATTTTGCGGATCGTGGACGAGGGGTATCAGGTGACCGAAGACGATGTCAAAAACGGGAAGATCCTCGTGGAACTGGATTCCTCCGATCTGCAAACCCGGATTACGCAACAGGAGATTCAGTATCAGCAGGCGGTGGCCAGCCTGATTGACGCGCAGCAGAACTACGAAATTCAGGTGAACCAGAATCAAAGCGACATCAAGGCCGCGGAACAGAAAGCGCGGTTCGCCCGGATGGATTTCGACAAATATCTCGGCGTCACCGTGACCGAAAAGATCATCAAGCAATACGGGCTGGACAAAATTCTGGAGGCCACCGGCACCAACAACGTCGAGGCGGAAAGCCTGGCGGAGGAGGCGAGCCTGGAAAAAGATGAAGCGGAAGCCGCGGCCGCGCCCGCCGGTCCGCTGGCCGGCACCAATGTGGCGGCTGTCGCCGCGGCCGCGCCGGCGGCGTCCCCTTCACCGGCCGCCGGTGGCGCCGTTTCCAACGCGCCGGGGTTGCAAGCCGCGGATGAAGCGCCATTGCCGGCGGCGGCAACGTCCGCGACGAACCTGGCTTCCGGCCCGCCGGCGACCCTCCTGATGGCGACCAACTCCGGAACGCCGATGTTTCCGGTCGGCCTGATTGATTTCACGGAATACGCCAGCCTCGATGCCCTGGGCGACGGCGAGGCCAAACAGAAATTGCGCCAGTTGGATGATGATTTGCAGACGGCCGAGAAGGAATTGGGGCAGGCCAAGGCCACGCTCGAAGGCACGGAGCGCCTGTATGCGAAACAGTTCGTCGCGAAAACGGAGCTGGTGCGCGACCAGTTGTCCGAGAACAGCTCGGAATTGAAGGTGCAAACGGCGGAAACCGACCGGGCGTTGTTCCTGAAATACGATTTTCCGAAAGCCGCCGAGCAGTCGCTTTCCGACTACACGGAGGCGGTGCGCGAGCTGGACAAGGCCCGGCGCGTGGCCATTTCCAAACTCGCCCAGGCCCAGGCCAAGCTGCGGTCGGCGCAGGGCCAGTATGGCGTCCAAAACCGGGAGCTCAAGGAACTCAAGGATCAACTGGCCAAATGCACCATTCGCGCCGAGAAACCCGGGCTGGTCGTTTACGGCGACGCCAACGACAGCGGCTTTTACTTTGGCAACCAGGAACCCATCCGCGAAGGCGCCACCGTGCGTGAACGGCAAACCATCATCACCATTCCCGACATGACGCACATGGCGGTGAACGTCAAGATTCACGAAAGTTACATCCAAAAAATCAAGAAGGGACAAAAGGCGGTGGTCACGGTGGACGCCTTTCCCGACCAGGTGTTGCATGGCGAAGTCACCAAGGTGGGCGTGCTGCCGGATTCGCAAAACCGCTGGATGAATCCGGATCTGAAAGTTTATGACACGACCATCGCCATTGACGGCACCTATGACTGGATCAAGCCGGGCATGAGCGCCAAGGCGGAAATCCAGGTGAAGCAGCTCGACAACGTGGTTTACGTGCCGGTCCAGGCCGTGACGCCGGACAATGGCCGGCAGGTTTGCTACGTTGCCGATGGATTCAAACCGGAAAAGCGCGTGGTGGAGGTTGGCGATTACAACGATGAATTCATCGAAATCAAACACGGTTTGCGGGCGGGCGAACCCGTGTTGCTGCGGCTGCCCGACGGCGTGGAACGCGGCGATGCGGACCGTGAACTGCCGGCCGAGGCCAGGCCCGCCGGTTCGAAACAAAACCCGGCGCCGGCCACGCCGGCAAACCAGGCTGCCGCGGAGCAGAAGGTGTGA
PROTEIN sequence
Length: 675
MRMLSNGWKFIRRQPRWRLIVAGAVVLVLGGWGLTRGGGSAAKIPTFTARRGPLEINVMEGGSLQAQESQQVKCEVRVGYQGTKILRIVDEGYQVTEDDVKNGKILVELDSSDLQTRITQQEIQYQQAVASLIDAQQNYEIQVNQNQSDIKAAEQKARFARMDFDKYLGVTVTEKIIKQYGLDKILEATGTNNVEAESLAEEASLEKDEAEAAAAPAGPLAGTNVAAVAAAAPAASPSPAAGGAVSNAPGLQAADEAPLPAAATSATNLASGPPATLLMATNSGTPMFPVGLIDFTEYASLDALGDGEAKQKLRQLDDDLQTAEKELGQAKATLEGTERLYAKQFVAKTELVRDQLSENSSELKVQTAETDRALFLKYDFPKAAEQSLSDYTEAVRELDKARRVAISKLAQAQAKLRSAQGQYGVQNRELKELKDQLAKCTIRAEKPGLVVYGDANDSGFYFGNQEPIREGATVRERQTIITIPDMTHMAVNVKIHESYIQKIKKGQKAVVTVDAFPDQVLHGEVTKVGVLPDSQNRWMNPDLKVYDTTIAIDGTYDWIKPGMSAKAEIQVKQLDNVVYVPVQAVTPDNGRQVCYVADGFKPEKRVVEVGDYNDEFIEIKHGLRAGEPVLLRLPDGVERGDADRELPAEARPAGSKQNPAPATPANQAAAEQKV*