ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_295472_82

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(102145..102600)

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746596 similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 151.0
  • Bit_score: 188
  • Evalue 3.80e-45
transposase similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 151.0
  • Bit_score: 186
  • Evalue 5.30e-45
Transposase {ECO:0000313|EMBL:AIE84828.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 151.0
  • Bit_score: 186
  • Evalue 2.60e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 456
ATGCCCCAGTCGCTCGCAAAGATTCTCGTGCATACGGTTTTTTCAACCAAAGACCGGCGTCCGTTCCTGCGTGACAAACCGCTGCGCGAAGAATTGCATCGTTACGTCGGCGGCATCCTGACCAATCTTGATTGCCAGCCCGTCATCATCGGTGGCGTCGAAGACCATGTTCATATTCTCTCGACGTTAGCACGCACCTGCGCAGCGGCGGAGATGGTCAAAGAAGTGAAACGCGGCTCGTCGCTCTGGCTGAAATCCAAAAGCCCCGGCCTGCATGATTTCGCCTGGCAGAATGGCTACGGGGTTTTTTCCATCGGCTTTTCTCAAGTCGAGACGGTGCGGAATTATATCGCAGGTCAGGAGGAACATCATCGGAAGATTTCGTTTCAAGACGAATTTCGCGAGTTTCTGAAACGCTACCATGTTGAATTTGATGAGCGGTATGTGTGGGATTGA
PROTEIN sequence
Length: 152
MPQSLAKILVHTVFSTKDRRPFLRDKPLREELHRYVGGILTNLDCQPVIIGGVEDHVHILSTLARTCAAAEMVKEVKRGSSLWLKSKSPGLHDFAWQNGYGVFSIGFSQVETVRNYIAGQEEHHRKISFQDEFREFLKRYHVEFDERYVWD*