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berkeley_reactor_200306_planktonic_scaffold_295472_124

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 146789..147955

Top 3 Functional Annotations

Value Algorithm Source
RhaT l-rhamnose-proton symport 2; K02856 L-rhamnose-H+ transport protein id=24442050 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 394.0
  • Bit_score: 479
  • Evalue 2.10e-132
rhamnose-proton symporter similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 387.0
  • Bit_score: 427
  • Evalue 2.10e-117
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 390.0
  • Bit_score: 592
  • Evalue 2.40e-166

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Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1167
ATGGGCAATCCATTCCTTGGCGTCTTCTTCCACTGGCTCGGCGGCCTGGCTTCGGGCAGTTTTTACGTGCCGTATCGCGGCGTGAAAAAATGGTCGTGGGAAACCTACTGGCTCGTCGGCGGTGTTTTTTCGTGGGTCATCTGTCCCTGGTTGTTTGCGGGTTTCATGACCCATGATCTGATTGGGGTGCTCAAGCAACAATCGGCCGGCACCCTTTGGTGGACTTATTTCTTTGGAGCCATGTGGGGATTCGGCGGGTTGACGTTCGGTCTGACCATGCGTTATCTCGGCATGTCGCTCGGCATGGGCGTGGCGTTGGGCTACTGTGCGGCGTTCGGCACGCTGATTCCGCCGATTGCCAAGGCCATTGCCCCCGGTTTGCCGGTGGGTTCCAGCATCGTGGAAATTGCCACGTCCACGTCTGGTCAAGTGACTTTGGTTGGCGTGGCCGTCTGTTTGCTCGGCATTGGCATTGCGGCCCTGGCGGGCCTCACCAAGGAACGGGAAATGCCCGAGGAACAGAAAAAGAAGGCGATTGCGGAATTCAATTTCAAGAAGGGCATTTTGGTGGCGACATTTTCCGGCATCATGAGCGCCTGCTTTGCCTTCGGCCTTACCGCGGGAAACCCCATTGCCGACGCTTCCAAAGCGGCGGGCACCACTGAGATTTGGACCGGATTGCCGAAGCTGTGCGTGGTGCTGGCCGGCGGATTTACCACCAACTTTGTCTGGTGCGTTTTGCTGAATCTCAAGAACCGCTCCGGCTACCAGTATCTGGCTTCGCACGTCAAAGAAGAACACGCCCATCACGGCGGTCTTGGCAGTGGCGAAGCCGGCGCGGCATCTTCCGCCGCCGGCAAAAGCGCGCTGGTGGATTTAAAAATCCCCGTGTTTGCCAATTACCTCTTCTCGGCCCTGGCGGGCACCTGCTGGTATTTCCAGTTTTTCTTCTACACGATGGGCGCCACCCAGATGGGCAAATACGATTTCGCCTCCTGGACGCTGCACATGGCGAGCATCATCATTTTCAGCACCATGTGGGGCTGGATTCTGCATGAGTGGAAAGGCTCCAGCCGGAAGGCGCATTTGCTCATTGCCGGCGGCATTGGCACGCTCATCCTGTCCACCATCGTCATTGGCTTTGGCACCTACTTGAAGAGTAAATGA
PROTEIN sequence
Length: 389
MGNPFLGVFFHWLGGLASGSFYVPYRGVKKWSWETYWLVGGVFSWVICPWLFAGFMTHDLIGVLKQQSAGTLWWTYFFGAMWGFGGLTFGLTMRYLGMSLGMGVALGYCAAFGTLIPPIAKAIAPGLPVGSSIVEIATSTSGQVTLVGVAVCLLGIGIAALAGLTKEREMPEEQKKKAIAEFNFKKGILVATFSGIMSACFAFGLTAGNPIADASKAAGTTEIWTGLPKLCVVLAGGFTTNFVWCVLLNLKNRSGYQYLASHVKEEHAHHGGLGSGEAGAASSAAGKSALVDLKIPVFANYLFSALAGTCWYFQFFFYTMGATQMGKYDFASWTLHMASIIIFSTMWGWILHEWKGSSRKAHLLIAGGIGTLILSTIVIGFGTYLKSK*