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berkeley_reactor_200306_planktonic_scaffold_295472_131

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 160241..161254

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSX4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 335.0
  • Bit_score: 300
  • Evalue 1.50e-78
Type II secretion system protein {ECO:0000313|EMBL:EEF57058.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 335.0
  • Bit_score: 300
  • Evalue 2.10e-78
type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 354.0
  • Bit_score: 137
  • Evalue 3.70e-30

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAAATACGACGAATTTGCGTTCTTCAACCAGCAGCTCGCGGCAATGCTGCGCGATGGCATTCCGCTCGAAGGCGCGCTGCAGCGGTTGTGCGGGGAAATGCGCGCCGGTTCGCTGCGCACGGAATTGCAGTCGCTCGAAGCCGACCTCGCCAAAGGCGCGCCGATGGGCGAAGCCCTGAAACCACGGCAACTGCCCGAACTCTACAAACGCATGATTTTGGTCGGCGTCAAAAGCGGCGACCTGCCCGGCGTGCTGACGATGATGGCCGATCATTTCCAGCGCCAGAACAACGTCTGGACGCGCCTCAAAAGCATGATGACCTATCCGTTGATCGTGATGCTGGCCGCGTTCTTGATTTCAACGGTCCTGGCCATCCTGTGGACCTATGTCATCGGTCCGGGTTTCAAAGATATATTCGCCGGCATGGGAATCAGAATGCCCGCCGCTACTCTGTTTGCCCTGGCTAGTTTGAAAACCATCTGGATTTTTCCCGTGTTGCTGGGACTGCTGTTCGTGCTGGTTGCCGCCATTATTTTCGTGCCAACAATGCGCGGAAAATTTTTGTGGCGATTGCCCGCGTTCAAGGAAGCCATTGTTTCACGCATGGCGTCGTCGTTGACATTGCTGATGAAGAATGGCGTTTCGTTTCCGGACGCCATCGGCTTGGTGGAACAGCTTGAGACCAGCGCTGCGGCCGCCGCCGACCTGCGGCGTTGGCGCGGGAAACTTGCCGCCGGCATCGTGAAATTTTCTGAAATCGCGAGCGGCAACCAGATGGTTCCGCCAATGTTTGTCTGGGTGGTGGCCAGCGCGGGTGAAGACATGATCGCCGGTTTCAATCGCGCTGCGGAAATCTATCACTCGCGAGCGCTTTACCGCACGGAAGTCGCCTTGTTCTCGGTGCTGCCTGTGGCGTCGCTTTTCCTGGGAGCCATCGTGATTTCGCAGGCATTTCTGGTCATCAGCATGTTTCTCCCGTTGTTTGTCATGGTCAACGGCCTTGGGGGTTAA
PROTEIN sequence
Length: 338
MKYDEFAFFNQQLAAMLRDGIPLEGALQRLCGEMRAGSLRTELQSLEADLAKGAPMGEALKPRQLPELYKRMILVGVKSGDLPGVLTMMADHFQRQNNVWTRLKSMMTYPLIVMLAAFLISTVLAILWTYVIGPGFKDIFAGMGIRMPAATLFALASLKTIWIFPVLLGLLFVLVAAIIFVPTMRGKFLWRLPAFKEAIVSRMASSLTLLMKNGVSFPDAIGLVEQLETSAAAAADLRRWRGKLAAGIVKFSEIASGNQMVPPMFVWVVASAGEDMIAGFNRAAEIYHSRALYRTEVALFSVLPVASLFLGAIVISQAFLVISMFLPLFVMVNGLGG*