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berkeley_reactor_200306_planktonic_scaffold_295472_138

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 164451..164666

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, FmdB family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSM8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 76.0
  • Bit_score: 97
  • Evalue 5.40e-18
Regulatory protein, FmdB family {ECO:0000313|EMBL:EEF57147.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 76.0
  • Bit_score: 97
  • Evalue 7.60e-18
FmdB family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 52.0
  • Bit_score: 55
  • Evalue 5.10e-06

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 216
ATGCCAATTTACGAATTTCATTGTGAAAAATGCGGCCGGGACAGCGAAGTGCTCGTGCGTTCCTCGGACTGGAGCGGAACCAAATGCCCGCACTGCGGTTCGAGCCGACTGGGCAAAAAATTCTCAACCTTTGCCGCGGCCGGCGGCGGTGATGATGCCGGCGCGTGTGATACCGGCGGCGGCGGTTGCTGCGGCGGGCATTGCCACGGGCATTGA
PROTEIN sequence
Length: 72
MPIYEFHCEKCGRDSEVLVRSSDWSGTKCPHCGSSRLGKKFSTFAAAGGGDDAGACDTGGGGCCGGHCHGH*