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berkeley_reactor_200306_planktonic_scaffold_295472_146

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(169616..171226)

Top 3 Functional Annotations

Value Algorithm Source
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 425.0
  • Bit_score: 197
  • Evalue 6.30e-48
Multi-sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAW4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 354.0
  • Bit_score: 248
  • Evalue 1.10e-62
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF63149.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 354.0
  • Bit_score: 248
  • Evalue 1.50e-62

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1611
ATGCCGCCGCCGCTGCCCGCTGCTTTCAAGACCGGCGATTCGTTGGGATTGGCATGGGATGGCGCCTTGCGTAAGCTCTTGCGCGGGCCGGACCGCGCTGGTGCGGAGGCCTTTTTTGTTATGCCAACGTCGTTCCATCCACAGCCGAAATCGTCAGATCTCCAGTCGGTGGTCCGGGCGCTGCCGGCCCGGGCGGGCGGCGCTTCCTGCCGAGATGAATTGGCGGCCGTCGTCGAATTTTCCAACGATGCCATTTTCACCCGCACGATTGACGGAACCATCACCACGTGGAATGCGGCGGCGGAACGGATTTTCGGGCATTCGGCCGCGGAGATGGTGGGACGTTCCGGGCGCCGGCTGCTGCCACCCGGGCGGCAGGATGAATTTCGAGATTATCTCGAACGGCTGGGGGCGGGGGAAGTGGTGCCGGGCTATGAAACGGAACGGCGGCACAAGGATGGACGGCCGTTGTGGGTTTCGTTGACGCTCTCGCCATTGCGGGACGCGGCAAAACGGTTGACCGGGTTTTCCACCATCGCCCGAGACGTCACCGAAGAACTGCGCGCGCGCGGCACGCTTCAGCGGCAGGAGCGCGAATTGCAGGATCTTTTCGACGAGGCGTCGGTGGGGCTGGTTTTAGTGGCGCGGGATGGCACTATTTTGCGGGCCAACCGCGCCTTTTCGGAATTGCTGCATCTGGCGCCGGGACAGATTGCCGGCTGCGCCCTGGCGGATTTTCACGTGGAACCCGCCACCGTCAAGCCGCTGCTGGACCGGCTGGCCGCGCGGCAGACGCTGCACAATTTTCCGGCCGAACTGCGCGGTCGCCATGGGCAGTCGCGCCACGTGTTGATGGATGCGAATGTGTTTTGGGAAAAGGGCCGCTTCGTGCATTCCCGCTGGTTCGTGCGTGACATTTCGCGGCGCAAACAACTCGAGCGGGAACTGCTCGAATTGAGCGAGCATGAGCGGCGCGGCTTTGCCCAGGAACTGCACGACGGCCTTGGCCAGCAACTGGGCGGCATCGCGTATTTGAGCAATGTGTTGCAGGAAAAATTGGCGGAACGCCAGGCGCCGGAAGCCGGCGAAGCGAAGCGCATCTTCGGTCTGGTTCGCGACGCGATCGAACAGACCCGCCGGATTTCGCGCGGGCTCTCGCCGATTCGTCCCGAGCCGGAGGGATTGATGACCGCCTTGCGCGAGCTGGCGGCCCAGACCACGGAATTGTTCCGCGTTCGCTGCCGGTTCCTCTGTCCGCAGCCGGTGTGGATTGAGGATTCTTCGCTCGCGTCGCACTTTTATCGCATTGCCCAGGAAGCCGTAAACAACGCGCTCAAACATGCCCGGTCGGGGCGGATTGACATTCAGTTGCGCCGCCGGCCGGACCAATTGCTGTTGAGCATCAAGGATGATGGCAAGGGGATCGGCGAAATTTCCCCCCAGCGCCAGGGACTCGGATTGCACATCATGCAATACCGCGCCGGTCTGGTGCGTGGCAGTCTGACCGTGCGTCCGCGCCGCCGCCGGGGAACCGAGGTGACGTTTGCCGTGACGAAGCACGCGCCCAATTCCGAAGGACGCGTCGCCAAAACAACCCGTTCAAAATCCTGA
PROTEIN sequence
Length: 537
MPPPLPAAFKTGDSLGLAWDGALRKLLRGPDRAGAEAFFVMPTSFHPQPKSSDLQSVVRALPARAGGASCRDELAAVVEFSNDAIFTRTIDGTITTWNAAAERIFGHSAAEMVGRSGRRLLPPGRQDEFRDYLERLGAGEVVPGYETERRHKDGRPLWVSLTLSPLRDAAKRLTGFSTIARDVTEELRARGTLQRQERELQDLFDEASVGLVLVARDGTILRANRAFSELLHLAPGQIAGCALADFHVEPATVKPLLDRLAARQTLHNFPAELRGRHGQSRHVLMDANVFWEKGRFVHSRWFVRDISRRKQLERELLELSEHERRGFAQELHDGLGQQLGGIAYLSNVLQEKLAERQAPEAGEAKRIFGLVRDAIEQTRRISRGLSPIRPEPEGLMTALRELAAQTTELFRVRCRFLCPQPVWIEDSSLASHFYRIAQEAVNNALKHARSGRIDIQLRRRPDQLLLSIKDDGKGIGEISPQRQGLGLHIMQYRAGLVRGSLTVRPRRRRGTEVTFAVTKHAPNSEGRVAKTTRSKS*