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berkeley_reactor_200306_planktonic_scaffold_302219_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 777..1334

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00035EB6B1 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 185.0
  • Bit_score: 293
  • Evalue 1.30e-76
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 175.0
  • Bit_score: 292
  • Evalue 2.50e-76
elongation factor P similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 185.0
  • Bit_score: 216
  • Evalue 3.50e-54

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCAACAGCAAACGATCTTCGCCGCGGCATGGCGATCAATTACAACGGCGATATTTCGGTGGTGCTCGACATGCAGCACCGCACGCCGGGCAACTTGCGCGCCTTTGTGCAGGCCACGCTCCGCAGCATCCGCACCGGCAAATCCTCCGACGTGCGCTTCAGTTCCACCGAGCGCATTGACCCGGTGCCGATGATCACCACCAAGATGGAATTCAGCTACAAGGACGGCGAAGATTACGTGTTTACCGACCCGGAAACCTACGAAACCGTCACCCTCTCCAAGGAACTGGTCGGCGACGCCAAGGATTACCTGGTCGAGAACGGCGCCGTGACCGTGACCTTCGTGGATGAAAAGGCGGTCAGCGTGGAAATTCCGGCCAGCGTCATCCTCACCGTGACCGACGCACCCGAAGGCGTCCGGGGCGATTCCGCCAACAACGTCCAGAAGGCGATTGTGCTGGAAACCGGCATCACCGTGCAGGCGCCGTTGTTCATCAAAACCGGCGAAAAAATCAAGGTGGACACCCGCACCGGCAAATACATGGAGCGCGCCTAA
PROTEIN sequence
Length: 186
MATANDLRRGMAINYNGDISVVLDMQHRTPGNLRAFVQATLRSIRTGKSSDVRFSSTERIDPVPMITTKMEFSYKDGEDYVFTDPETYETVTLSKELVGDAKDYLVENGAVTVTFVDEKAVSVEIPASVILTVTDAPEGVRGDSANNVQKAIVLETGITVQAPLFIKTGEKIKVDTRTGKYMERA*