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berkeley_reactor_200306_planktonic_scaffold_302219_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(6475..8487)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00035EF22B similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 333.0
  • Bit_score: 278
  • Evalue 1.20e-71
periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 333.0
  • Bit_score: 240
  • Evalue 1.10e-60
Periplasmic binding protein {ECO:0000313|EMBL:ABU59000.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 333.0
  • Bit_score: 240
  • Evalue 5.20e-60

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Taxonomy

Roseiflexus castenholzii → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 2013
ATGAACGATCTGCGCATCATTTCATTTTTGCCGGCAGCGACCGAGATGGTCTATGCGCTCGGTCTTGAAGGCGCGCTCGTTGGCGTGACGCATGAATGTGATTTCCCGCCGGCGGCCAAAGCCAAGCCAGCCGTGGTCAGGCCGGCTTTGCCGTTGGAGAAAATGTCGCTGCACCAGATTGATGTCGCGGTTGCCGCGCGTATCGGCAGCGGCCAAAGCCTGTATGAAGTGGATGAAACCCTGTTGCGCGAGCTAAGGCCGAATTTGATTCTCACCCAGAATCTGTGCCAGGTCTGCGGGCCGTCCGGCAACGAAATTACCGTTGCGCTAAAAAACCTCCAGCCCAGGCCAGAAATTCTCTGGATGACGCCGCATTCCCTGGCGGAAATTTTTCAGAATCTCCGCGATTTGGCAAACATCACCGGACGGGTGGCGCAAGCCGAAACTTGGATCGCTGCCGCCGACCGACGTTTGCAACGCATTTCCGCGCAGCTCCAAAAACCGGTCCATGACACGGAGCGCAGGCGGGGCAAACCTGCAGCTTTGCCCTGTCAGATTCATGGTCCCAGCGTGCATCCAATTCTGGAAGCCGAAGCTCCCCATAAACCGCGCGTCCTCTTTCTCGAATGGGGCGATCCGTATTATTGCTGCGGGCATTGGGTGCCTGAAATGATTGAACGGGCAGGCGGCCAGGATGCGCTGGGGCGCAAAGGCGCGGATTCGATTCGGATTCCGTGGGCCGAAATCGCTGCCTGGCAGCCGGAGGTTTTGATTGTTTCGCCCTGTGGTCTCAACACGGAACAAGCGGTTGCCCAGGCCGGCCAATGGTTGCGACAGCCGGGCTGGAGTGAATTGCCCGCAGTTCGCAACGGTCGGGTTTACGCTGTGGACGCCAACGCTTACTTTGCCCGGCCCGGCCCGCGGGTGGTGGACGGCGTGGAATTGCTGACGCATCTGATTCATCCTGATGCTTTCGCCTGGAGCGGTCCCGCCGATGCTTTCCAAAAAATTCAAGTCAGCCGCCTTTGGCCTTTGCCAACGCGCATAAAAACCTGCGCGGAATGCGGGGCGGAATTTCTTTGCGGGCCAACGCCCGAAACCGGGCGGTGCTGGTGTGACGAACTGCCGCCGTTGCCGCCGTTTCCCTCACCCGGTGCGGATTGTCTCTGCCCCGCGTGCTTAAAAAATGCCGTGGCCACCACGAACAGGACAAACGCAACGAACGCAACAGACGTTTCTGGCGGGCTTGCAGCACTGAAGCGAAGCGAAGGCGGATTCACCTTGATCGAACTGCTCGTGGTGATCGCCATCATTGGCATTCTTTCCGCGATGTTGTTGCCGGCCTTGTTGCGGGCAAAAGCCGCGGCACAAAGCGCCGACTGCACGGGGAATGTCCGCCAGATGGGACTCGCCCTGCAGCTCTATTGGAATGACAACGCGGGCACCTGTTTCCGCCTGTCCGACGGCGCGACCAACAACGGCACGCTTTGGTGGTTCGGCTGGCTGGACAATTCCCGGCCGGAAGGGCAGCGGCCCTTCGATCTTTCGACGGGCAAATTGCATCCGTATCTGGGCGGAAGCGACGTGCGGCTTTGCCCGGCCATGCCGACGTCCGGCCCGCTCTTAAAATTGAAGGCCACCAATGTTGTTTGCAGTTACGGCTACAACGGGGCGCTCTCTGCGCCGGCCGGCCGGCCGGCCGTGACCGTGAACCGCCTGATGCATCCCTCCGGCACGGCGGTGTTTGCCGACTCGGCGCAGGCGAATGATTTTCAGGCGCCGGCGTCGCGCGCACATCCGATGCTGGAGGAATGGTATTTTCTCGACGCCGCCACGAATTTTTCCAGCGCCGGTTACTACGGACACGTTCACTTCCGTCATCTGGAACGGGCCAATGTCACCTTCGCCGACGGCCACGTGGAGCCGGAGAAAATGATGGACGGTTCGCTCGACCGCCGCCTGCCCGATCAACACCTCGGCCAGTTGCCCGTCGGGATGCTGACGGTTCCTTGA
PROTEIN sequence
Length: 671
MNDLRIISFLPAATEMVYALGLEGALVGVTHECDFPPAAKAKPAVVRPALPLEKMSLHQIDVAVAARIGSGQSLYEVDETLLRELRPNLILTQNLCQVCGPSGNEITVALKNLQPRPEILWMTPHSLAEIFQNLRDLANITGRVAQAETWIAAADRRLQRISAQLQKPVHDTERRRGKPAALPCQIHGPSVHPILEAEAPHKPRVLFLEWGDPYYCCGHWVPEMIERAGGQDALGRKGADSIRIPWAEIAAWQPEVLIVSPCGLNTEQAVAQAGQWLRQPGWSELPAVRNGRVYAVDANAYFARPGPRVVDGVELLTHLIHPDAFAWSGPADAFQKIQVSRLWPLPTRIKTCAECGAEFLCGPTPETGRCWCDELPPLPPFPSPGADCLCPACLKNAVATTNRTNATNATDVSGGLAALKRSEGGFTLIELLVVIAIIGILSAMLLPALLRAKAAAQSADCTGNVRQMGLALQLYWNDNAGTCFRLSDGATNNGTLWWFGWLDNSRPEGQRPFDLSTGKLHPYLGGSDVRLCPAMPTSGPLLKLKATNVVCSYGYNGALSAPAGRPAVTVNRLMHPSGTAVFADSAQANDFQAPASRAHPMLEEWYFLDAATNFSSAGYYGHVHFRHLERANVTFADGHVEPEKMMDGSLDRRLPDQHLGQLPVGMLTVP*