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berkeley_reactor_200306_planktonic_scaffold_302219_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20881..21336

Top 3 Functional Annotations

Value Algorithm Source
SsrA-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT05_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 151.0
  • Bit_score: 237
  • Evalue 7.10e-60
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 151.0
  • Bit_score: 237
  • Evalue 1.00e-59
SsrA-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 148.0
  • Bit_score: 169
  • Evalue 6.70e-40

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCTGACATTGTCACCAACCACAAAGCCCGGCGCGATTATCACATCCTCGAAACGTTCGAGGCGGGCATCGTGTTGCACGGCACGGAAGTCAAGGCGTTGCGCGCGGGCAAGGGGCAGATTGCCGATGCGTTCGCGCGGGTGGAGAAAAACGAGGTCTGGCTGCACAACGCCCACATTGACGAGTATTCGCACGGCAACATCCACAACCACGCCCTCAAGGCGCCGCGCAAGCTGCTCCTGCACAAGCCGGAGATTCGCAAACTGTTCGGCCTGGCGGCGGTGAAGGGCAACGCGCTGTTTCCCCTGGCGTTTTATTGGAAAAACGGGAAGGTGAAGGTTTCCCTCGCCGTCGGCAAAGGCAAACAGCAATTCGACAAACGGGAGGATCTCAAGCAGCGCGATTCCGAGCGCGAGATGAAACGGGCCACGATGAAATGGACCAAAGGCCGGTAA
PROTEIN sequence
Length: 152
MADIVTNHKARRDYHILETFEAGIVLHGTEVKALRAGKGQIADAFARVEKNEVWLHNAHIDEYSHGNIHNHALKAPRKLLLHKPEIRKLFGLAAVKGNALFPLAFYWKNGKVKVSLAVGKGKQQFDKREDLKQRDSEREMKRATMKWTKGR*