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berkeley_reactor_200306_planktonic_scaffold_311853_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 40441..42000

Top 3 Functional Annotations

Value Algorithm Source
UbiD family decarboxylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCT0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 519.0
  • Bit_score: 887
  • Evalue 5.90e-255
UbiD family decarboxylase {ECO:0000313|EMBL:EEF62276.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 519.0
  • Bit_score: 887
  • Evalue 8.30e-255
UbiD family decarboxylase similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 519.0
  • Bit_score: 489
  • Evalue 7.80e-136

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1560
ATGGCTTTTGATTCCTTTCGCGATTTCGTCAACGCGCTCGACCGCGCGGGCGAACTGAAACGCATTTCCCAGCCCGTCGCCACCGAACTCGAAATCACCGAGATCGCCGACCGCGAAATGAAATTGCCCGGCGGCGGCCAGGCGCTGTTGTTCGAGAAACCCACCATCAACGGCGTCGTCTCGCCGTTCCCCGTCGCCATCAACACGATGGGCTCGTGGAAGCGCATGGCCATGAGCATGGGCGCGGAAACCGTGGACGAAGTGGCCAACGAACTCGGCGCGCTGATGAAAGCCAAGCCGCCGACCAGTTTCAAAGAAGCCATCAAGCTGCTCTCGCTCGCACTGGATTTGCGTCACGCCAAACCGAAGGTCGTAAAAAGCGGCTCGTGCAAGGATGTGATTCACAAGTTTGACGCGCCGGCTTCGCGCAAAGAACCGTGGCCGAAGGCGCCCGACATCACCGCTGTAGCGGCGGTCTGCGACCGCCGAGAAGAAGACGGCGCTCACAGAGCGCCGCTACAAACCCCAACGCTCGCGAATCTCCCCATCCTGAAATGCTGGCCGCTCGACGGCGGGCGTTTCATCACCCTGCCCTGCGTTGTCACCAAAGATCCGGACACCGGCGAACGAAATCTCGGCATGTATCGCGTCCAGATTTACGACGACCAAACCACCGGCATGCATTGGCAGTTGCAGAAAGTCGCCGCGCGGCATGGCCGTCGTTACTACGAAAAAGGCGAGCGCATGCCCGTCAGCATCTTCATCGGCGGCGACCCGATGTTTCCCTTTGCCGCCACCGCGCCGTTGCCGGATGGCCTGGACGAATTTCTCCTCGCCGGTTATCTCCGCAAAAAATCCGTCGAGCTCGTGAAATGCGAGACCAACGACCTCGAAGTTCCCGCCAACGCCGACTTCGTCATCGAAGGCTACGTTGACCCGACCGAGCCGCTGCGCGACGAAGGGCCGTTCGGCGACCACACCGGCTATTACACCTTGCCCGAGCCGTATCCCGCGTTCCACGTCACCGCCATCACGCATCGCAAGGACGCTGTGTATCCCTGCACCATCGTCGGCATCCCGCCGATGGAAGATTTTTACATCGGGGGCGCGAGCGTGAAACTGTTCCTGCCCATCTTCAAGATGAACTTCCCGGAAATCGTGGACATCGCGCTGCCGGCGGAAGGCGTGTTCCACAACCTCGTCTTCGTCAGCATCAAGAAGACCTATCCGATGCAGGCCTACAAAATCATGCACGGCCTCTGGGGCATGGGCCAGATGATGTTCACCAAATACCTCGTGGTGGTGGACGCCGACGTGAACGTGCATAACACCAGCGAAGTGCTGTTCCATCTCACCGCCAACACCGACCCGCAACGCGACAGCATCTTCACCAAAGGCCCGTCGGATGTTTTGGATCATGCCACCAGCGAAATCGCCATCGGCAGCAAACTGGGCATTGACGCGACGAAAAAACTGCCCGGCGAAGGTTTCAAACGCCCCTGGCCGCCGCTCATCAAGATGGATGAAAGCGTGAAGGCGAAGGTGGGGAAAATGTTATGA
PROTEIN sequence
Length: 520
MAFDSFRDFVNALDRAGELKRISQPVATELEITEIADREMKLPGGGQALLFEKPTINGVVSPFPVAINTMGSWKRMAMSMGAETVDEVANELGALMKAKPPTSFKEAIKLLSLALDLRHAKPKVVKSGSCKDVIHKFDAPASRKEPWPKAPDITAVAAVCDRREEDGAHRAPLQTPTLANLPILKCWPLDGGRFITLPCVVTKDPDTGERNLGMYRVQIYDDQTTGMHWQLQKVAARHGRRYYEKGERMPVSIFIGGDPMFPFAATAPLPDGLDEFLLAGYLRKKSVELVKCETNDLEVPANADFVIEGYVDPTEPLRDEGPFGDHTGYYTLPEPYPAFHVTAITHRKDAVYPCTIVGIPPMEDFYIGGASVKLFLPIFKMNFPEIVDIALPAEGVFHNLVFVSIKKTYPMQAYKIMHGLWGMGQMMFTKYLVVVDADVNVHNTSEVLFHLTANTDPQRDSIFTKGPSDVLDHATSEIAIGSKLGIDATKKLPGEGFKRPWPPLIKMDESVKAKVGKML*