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berkeley_reactor_200306_planktonic_scaffold_311853

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_311853_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(658..2298)
DNA (1641bp) protein (547aa)
60 kDa chaperonin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEG5_9BACT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
groEL; chaperonin GroEL
berkeley_reactor_200306_planktonic_scaffold_311853_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2391..2684)
DNA (294bp) protein (98aa)
10 kDa chaperonin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEG4_9BACT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
groS; Co-chaperonin GroES (HSP10)
berkeley_reactor_200306_planktonic_scaffold_311853_3
unknown

Not on your lists

comp(2764..3429)
DNA (666bp) protein (222aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3436..5385)
DNA (1950bp) protein (650aa)
Chaperone protein DnaK n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEG3_9BACT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dnaK; Chaperone DnaK (HSP70)
berkeley_reactor_200306_planktonic_scaffold_311853_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5839..6342)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XET6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61800.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_311853_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6415..6981)
DNA (567bp) protein (189aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Orotate phosphoribosyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEC6_9BACT
orotate phosphoribosyltransferase
berkeley_reactor_200306_planktonic_scaffold_311853_7
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

7190..7642
DNA (453bp) protein (151aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PS94_9CYAN
cupin
Tax=RBG_16_NC10_65_8_curated
berkeley_reactor_200306_planktonic_scaffold_311853_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7752..8642
DNA (891bp) protein (297aa)
Bile acid:sodium symporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG50_9BACT
Bile acid:sodium symporter {ECO:0000313|EMBL:EEF61212.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
bile acid transporter family protein
berkeley_reactor_200306_planktonic_scaffold_311853_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8623..10041)
DNA (1419bp) protein (473aa)
Aminotransferase class-III n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG49_9BACT
Aminotransferase class-III {ECO:0000313|EMBL:EEF61211.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
class III aminotransferase
berkeley_reactor_200306_planktonic_scaffold_311853_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10115..11245)
DNA (1131bp) protein (377aa)
Sulfotransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG51_9BACT
Sulfotransferase {ECO:0000313|EMBL:EEF61213.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_311853_11
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11603..12898
DNA (1296bp) protein (432aa)
hypothetical protein
Putative uncharacterized protein id=4315353 bin=GWF2_Lentisphaerae_52_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=RBG_13_Planctomycetes_62_9_curated
berkeley_reactor_200306_planktonic_scaffold_311853_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13068..13748)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIQ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60317.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_311853_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13849..15789)
DNA (1941bp) protein (647aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
speA; arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIQ3_9BACT
berkeley_reactor_200306_planktonic_scaffold_311853_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16172..17134
DNA (963bp) protein (321aa)
Metallophosphoesterase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR95_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EEF57638.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Metallophosphoesterase
berkeley_reactor_200306_planktonic_scaffold_311853_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17094..18023
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR94_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57637.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycosyltransferase 28 domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_311853_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18020..19279
DNA (1260bp) protein (420aa)
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR93_9BACT
Glycoside hydrolase family 1 {ECO:0000313|EMBL:EEF57636.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_311853_17
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(19288..20424)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEK7_9EURY
Tax=GWF1_Spirochaetes_41_5_curated
berkeley_reactor_200306_planktonic_scaffold_311853_18
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(20469..22064)
DNA (1596bp) protein (532aa)
Arylsulfatase A family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPK1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC82308.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
berkeley_reactor_200306_planktonic_scaffold_311853_19
bacterium UASB14, Bacteria

Not on your lists

comp(22469..23395)
DNA (927bp) protein (309aa)
glycosyl transferase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626EE9
Uncharacterized protein {ECO:0000313|EMBL:GAK52254.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
family 2 glycosyl transferase
berkeley_reactor_200306_planktonic_scaffold_311853_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23662..24147
DNA (486bp) protein (162aa)
UPF0234 protein Cflav_PD2481 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKT1_9BACT
UPF0234 protein Cflav_PD2481 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_311853_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

24258..25976
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQA9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57933.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_311853_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26029..26709)
DNA (681bp) protein (227aa)
DNA/pantothenate metabolism flavoprotein domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQB0_9BACT
DNA/pantothenate metabolism flavoprotein domain protein {ECO:0000313|EMBL:EEF57934.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dfp; phosphopantothenoylcysteine synthetase/decarboxylase
berkeley_reactor_200306_planktonic_scaffold_311853_23
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26837..27559)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC24_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62492.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_311853_24
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27645..28934
DNA (1290bp) protein (430aa)
AmpG protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRI0_SYNAS
ampG protein
AmpG protein {ECO:0000313|EMBL:ABC76691.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
berkeley_reactor_200306_planktonic_scaffold_311853_25
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

28989..30161
DNA (1173bp) protein (391aa)
Sulfatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF83_9BACT
Sulfatase {ECO:0000313|EMBL:EEF61581.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sulfatase
berkeley_reactor_200306_planktonic_scaffold_311853_26
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(30168..32633)
DNA (2466bp) protein (822aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTP5_OPITP
berkeley_reactor_200306_planktonic_scaffold_311853_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

32972..33988
DNA (1017bp) protein (339aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCJ2_9BACT
ruvB; Holliday junction DNA helicase RuvB
berkeley_reactor_200306_planktonic_scaffold_311853_28
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(34141..38997)
DNA (4857bp) protein (1619aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000373F83E
spore coat protein CotH
Spore coat protein CotH {ECO:0000313|EMBL:ADE54755.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
berkeley_reactor_200306_planktonic_scaffold_311853_29
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39374..40129)
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:KGD68975.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
berkeley_reactor_200306_planktonic_scaffold_311853_30
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

40441..42000
DNA (1560bp) protein (520aa)
UbiD family decarboxylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCT0_9BACT
UbiD family decarboxylase {ECO:0000313|EMBL:EEF62276.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UbiD family decarboxylase
Displaying items 1-30 of 65 in total

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