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berkeley_reactor_200306_planktonic_scaffold_311853

Search features with annotation key words

Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_311853_31

Not on your lists

42054..42869
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2F4_DESAP
Uncharacterized protein {ECO:0000313|EMBL:KKK68145.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_311853_32
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

43192..43647
DNA (456bp) protein (152aa)
transposase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746596
transposase
Transposase {ECO:0000313|EMBL:AIE84828.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
berkeley_reactor_200306_planktonic_scaffold_311853_33
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43807..46179
DNA (2373bp) protein (791aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036885A5
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AEC19687.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
berkeley_reactor_200306_planktonic_scaffold_311853_34
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

46192..47277
DNA (1086bp) protein (362aa)
putative NHL repeat containing protein id=14425775 bin=bin1_lowGC species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
NHL repeat containing protein
Tax=CSP1_2_Dadabacteria
berkeley_reactor_200306_planktonic_scaffold_311853_35
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

47464..49455
DNA (1992bp) protein (664aa)
Arylsulfatase A family protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B2N4_9BACT
sulfatase
Sulfatase {ECO:0000313|EMBL:AHF93342.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_311853_36
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

49465..50736
DNA (1272bp) protein (424aa)
Radical SAM domain protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5ELQ8_CORAD
radical SAM protein
Tax=CG_Arma_02
berkeley_reactor_200306_planktonic_scaffold_311853_37
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

50877..51152
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D176_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20088.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_311853_38
unknown

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51158..51520
DNA (363bp) protein (121aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_39
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(51580..52662)
DNA (1083bp) protein (361aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000366D0C2
GTPase RsgA
berkeley_reactor_200306_planktonic_scaffold_311853_40
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(52994..53197)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248D59C
hypothetical protein
YqjZ {ECO:0000313|EMBL:AEI39009.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
berkeley_reactor_200306_planktonic_scaffold_311853_41
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53302..54090)
DNA (789bp) protein (263aa)
Putative conserved integral membrane protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0B0_OPITP
integral membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
berkeley_reactor_200306_planktonic_scaffold_311853_42
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54131..55003)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036BE406
methylase
Tax=RBG_16_Gamma2_65_34_curated
berkeley_reactor_200306_planktonic_scaffold_311853_43
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55092..55958)
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YA74_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KJF44741.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
transcriptional regulator, AraC family
berkeley_reactor_200306_planktonic_scaffold_311853_44
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(56520..56807)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI000365321E
Uncharacterized protein {ECO:0000313|EMBL:KIJ85483.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
putative PnuC protein
berkeley_reactor_200306_planktonic_scaffold_311853_45
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(56811..57551)
DNA (741bp) protein (247aa)
tropinone reductase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B33D8E
tropinone reductase
Alr4456 protein {ECO:0000313|EMBL:BAB76155.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
berkeley_reactor_200306_planktonic_scaffold_311853_46
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(57572..58690)
DNA (1119bp) protein (373aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TVC9_9CYAN
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:AFY86136.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
berkeley_reactor_200306_planktonic_scaffold_311853_47
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(58692..59432)
DNA (741bp) protein (247aa)
Alkyl hydroperoxide reductase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VU83_9CYAN
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:ESA35577.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
redoxin
berkeley_reactor_200306_planktonic_scaffold_311853_48
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(59429..60196)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYI1_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDY20522.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
berkeley_reactor_200306_planktonic_scaffold_311853_49
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(60240..60794)
DNA (555bp) protein (185aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0Z7_ACISM
alkylhydroperoxidase
berkeley_reactor_200306_planktonic_scaffold_311853_50
Cobetia marina, Cobetia, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60944..61861
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HL91_CYAP4
Uncharacterized protein {ECO:0000313|EMBL:KGA02161.1}; TaxID=28258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Cobetia.;" source="Cobetia marina (Deleya marina).;"
LysR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_311853_51
unknown

Not on your lists

comp(62436..62933)
DNA (498bp) protein (166aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_52
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(62936..64612)
DNA (1677bp) protein (559aa)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
berkeley_reactor_200306_planktonic_scaffold_311853_53
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(64609..67086)
DNA (2478bp) protein (826aa)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
berkeley_reactor_200306_planktonic_scaffold_311853_54
unknown

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comp(67094..68992)
DNA (1899bp) protein (633aa)
cell envelope protein TolA
berkeley_reactor_200306_planktonic_scaffold_311853_55
unknown

Not on your lists

comp(68982..69362)
DNA (381bp) protein (127aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_56
unknown

Not on your lists

comp(69650..70258)
DNA (609bp) protein (203aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_57
unknown

Not on your lists

comp(70265..70438)
DNA (174bp) protein (58aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_58
unknown

Not on your lists

comp(70435..70989)
DNA (555bp) protein (185aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_59
unknown

Not on your lists

comp(71005..71592)
DNA (588bp) protein (196aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_311853_60
unknown

Not on your lists

71774..72724
DNA (951bp) protein (317aa)

This feature has no annotations

Displaying items 31-60 of 65 in total

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