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berkeley_reactor_200306_planktonic_scaffold_311853_39

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(51580..52662)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 360.0
  • Bit_score: 316
  • Evalue 4.00e-83
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000366D0C2 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 350.0
  • Bit_score: 324
  • Evalue 8.10e-86
GTPase RsgA similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 360.0
  • Bit_score: 316
  • Evalue 8.10e-84

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Taxonomy

Paenibacillus beijingensis → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGTTTGGACAAACTCGGTTGGAATATATCGCGCGAGGAGCAATTCGCGCCGCACCGCGCCAAAGGCTTCGTGCCTGCGCGCGTCGCCGTGGAAGACAAACATTATTACCGCGTCTGGACGGCGGACGCCGAACTCATCGCCCAAATCACTGGGAAAATCATTCACGAAGCGCGCGGCAATCATTCCAAGCTGCCGAAAGTCGGCGACTGGGTGGCGGTGAAAATGTTGCCGAACGAGGAAAAAGCCGCCATCCACGCCGTCCTCCCGCGCACCACGCAAATCACTCGCAAGAACAGCGGCCGCGACACCGCTGCGCAGGTGCTCGCCACCAACATTGAAACCATCTTTCTCGTTCATGCCGCCGATATTTCGTTCAATGCCGCGCGTCTCGAACGCATGCTCGTCATGGCCCACGACAGCGGCGCGCGCCCCGTGGTGGTGCTCAATAAGATTGACCTGTGCGAAGACCTGGATGCGCTCCTGGCCGAGGTGCAACGCCTTGCGGCGGAAGCGCCGGTGTTTCCCGTTTGCGCCATCACCGGACGCGGCCTGAAAAAGCTCGCCGCCGAAATCAAGCCCGGCGACACCGTCGCGTTCATCGGCACCTCCGGCGTGGGCAAATCCAGCCTCATCAACCGTCTGGCGGGCGATGAACTCATGCCCACGCTCGAAGTGCGCGAGCAGGACGCGAAGGGCCGTCATACCACGACGTGGCGTGAGATGATTTTTTTGCCCAAGGGCGGTGTGGTGATTGACACGCCCGGCATGCGGGAATTTCACCTGTGGGATCTCGCCGGTCCCGGCACGCGGGAAACCTTTCCCGAATTCGAGGAACTCGCTCTGCGCTGTCATTTCCGCGACTGCACCCACACGCAGGAAAAAGACTGCGCCGTGCTGGCCGAATTGAACGCCGGCAAAATCCCGCGCGACCGTTACGAAAGTTTCGTGAAGTTGCAACGCGAACTCGGCTATCTCCGCGAAGCTGAAAAGCGCGCCAATTGGACCAGCCGCCGCAAAAGCGACCGCGTGGCGCATCGCGCCTTCAATAAAGCCGTCACGCATCACAAAAGCCGGTGGTGA
PROTEIN sequence
Length: 361
MSLDKLGWNISREEQFAPHRAKGFVPARVAVEDKHYYRVWTADAELIAQITGKIIHEARGNHSKLPKVGDWVAVKMLPNEEKAAIHAVLPRTTQITRKNSGRDTAAQVLATNIETIFLVHAADISFNAARLERMLVMAHDSGARPVVVLNKIDLCEDLDALLAEVQRLAAEAPVFPVCAITGRGLKKLAAEIKPGDTVAFIGTSGVGKSSLINRLAGDELMPTLEVREQDAKGRHTTTWREMIFLPKGGVVIDTPGMREFHLWDLAGPGTRETFPEFEELALRCHFRDCTHTQEKDCAVLAELNAGKIPRDRYESFVKLQRELGYLREAEKRANWTSRRKSDRVAHRAFNKAVTHHKSRW*