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berkeley_reactor_200306_planktonic_scaffold_311853_34

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 46192..47277

Top 3 Functional Annotations

Value Algorithm Source
putative NHL repeat containing protein id=14425775 bin=bin1_lowGC species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 327.0
  • Bit_score: 150
  • Evalue 2.10e-33
NHL repeat containing protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 317.0
  • Bit_score: 135
  • Evalue 2.00e-29
Tax=CSP1_2_Dadabacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 327.0
  • Bit_score: 150
  • Evalue 2.90e-33

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Taxonomy

CSP1_2_Dadabacteria → Dadabacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGATTGTGAAAAAATCCCATCCGCTTCATCGGCTGGCCATGGTCCTCGCGCTGGCCGGTGCGACCGGCGTTACGGCCAGCGCCCAGAACCTTTACGTGGCGAACTTTGGCAATAACACGGTCTCGGAATTTGGTCCCACCGGCGGCCTGACCAACGCCGCTTTTGCCTCGGGCGCGAGCCTGAGCAACCCTTCAGGACTGGCTTTTGACCGGGCGGGCAATCTTTATGTCGCCAGTCACAATGGCATTGGCCACCAGACGGTTTCGGAATTTGATGCCGGCGGGAACCTCATCACGGGGTCGTTTGTTTCCAGTTCAAGCACGCTGGAAGGCCTCGCGTTTGACACCAATGGTCATTTTTACGTGGTGAATTCCAGCGCCAACCAGGTTTTGAAATTTGATGCCACGGGGGCGAACCTGCTCCAGACCATTTCCAGCACGAATTTTGACAGTCCCATTGGAATTGCCTTTGACACCGGCGGCAATTTTTACGTGGCGAACCGCGGCAACGGCAAGGTTTTGAAATTTGATCCCGCCGGGAACCCGGTCAACGGCGAAGTTTTTGCCGCCGGCTTGAACGAACCGGAAGGCGTGGCGTTTGACAGCCACGGCAATTTGTATGTGGCGAGTTTTCAGGATGGCACGGTTTCAAAATTCGATGCCAGCGGGAACCTCGTCAATGCGGCCTTCGCCTCGGGCTTGAGCCATCCCATCGGCGTGGCGTTCGACTACGCTGGCAATCTTTACGTGGCGAACTTTGCCGGCAACACCGTTTCCAAATTCGATTCCAATGGAAACCTGATCAGCGCGGCGTTTATTTCAGGGCTGAATTCTCCGAGCTACCTCGCTTTCCGGGGCATTTCCCTGCCCGTTTCGCCGCCGCCGACCGTGACCGTGACGAATGCGGGCGGAAATATCATCGTCTCCTGGCCGTTGACGCCGGGCTTTACGCTGCAACAAACGTCGGATTTGCAGGCGGGGAACTGGACGGCGAGCAGTTATCCCATTACCACCAACGGCGCGATGGGAAGTGTCACGCTTGAATCGCCGACGGGAAATTTATTTTTCCGGTTGAGCCATGAATGA
PROTEIN sequence
Length: 362
MIVKKSHPLHRLAMVLALAGATGVTASAQNLYVANFGNNTVSEFGPTGGLTNAAFASGASLSNPSGLAFDRAGNLYVASHNGIGHQTVSEFDAGGNLITGSFVSSSSTLEGLAFDTNGHFYVVNSSANQVLKFDATGANLLQTISSTNFDSPIGIAFDTGGNFYVANRGNGKVLKFDPAGNPVNGEVFAAGLNEPEGVAFDSHGNLYVASFQDGTVSKFDASGNLVNAAFASGLSHPIGVAFDYAGNLYVANFAGNTVSKFDSNGNLISAAFISGLNSPSYLAFRGISLPVSPPPTVTVTNAGGNIIVSWPLTPGFTLQQTSDLQAGNWTASSYPITTNGAMGSVTLESPTGNLFFRLSHE*