ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_310897_6

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 6613..7698

Top 3 Functional Annotations

Value Algorithm Source
DHH domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein id=12557299 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 346.0
  • Bit_score: 387
  • Evalue 1.30e-104
phosphoesterase RecJ domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 337.0
  • Bit_score: 191
  • Evalue 4.00e-46
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 342.0
  • Bit_score: 397
  • Evalue 1.10e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Omnitrophica_50_24 → Omnitrophica → Bacteria

Sequences

DNA sequence
Length: 1086
ATGTCGAAACAAACTGCCGGAAACAATTCAACCGCGGCGCCCACTCCCGCCCAGGAGCTGTTGCGGTTTCTGCGCGAACGCGGCCAGGCGTTGTCGCCGCTGCTGATCCTCACCCACGATTATCCGGATCCCGACGCTTTGGCCGCCGCGTTTGCGCTGCAATATCTCGCGGAGGAGGAATTCGGCATTGAATCGCGCATCGCCTTCGGCGGCGTGGTGGGCCGCATGGAAAACAAGGCCATGGTGCGGCTGCTGCGCATGCCCGTGCATCCGCTGCGAACCACCTGGCTCAAGCGCTTCGCGAATGTGGCGCTGGTGGATACGCAGCCGGCGTTTGAAAACAATTCGTTCCCGGCCGGCAGGAAGGCCGCCATCGTCATTGACCAGCACCCGTCGGCAACCAAGCCCAACGCCGATCTGGCGTTGGTGGACCCGCAATGCAGCGCCACCTGCGTGATCATCTCCCAGGCGTTGTTGCTGCTGGGAAAGCCGCTGCCCGAACGCGTTGCCACGGCGCTGGCTTACGGCATTCTCACCGACACGCTGGACCTGTATCGCGCGGAGCGGCCCGATGTGGTGCAGACTTACCTGCAGGTGCTGCATTATTGCGACATGCGCACGCTGGCAAAAATTCAAAACCCGGTGCGCTCGCGCAATTTCTTCGAGACGCTGCGCAACGGCATTCAGAACGCCACCTTGCAGCGTTCGTTGATGGTGTCCCATCTGGGCCAGGTGGAAAATCCCGACCTCATCGCCCAGGTCGCCGAATTTCTGCTGGCTTATCGCCGGACGAACTGGTGCCTGGCCACCGGACGTTTCCACGGCAAACTCCACGCGTCGCTCCGCAGTTCAACCCCCGATGTCGAAGCGGGAGACATCTTGCGCGCCGCCTTTCAAAATCCGCGCCAGGCGGGCGGCCACGGCCAGATTGCCGGCGGCAGTTGCCGCGTTGGCGGCGCCGCCACCGAGGAGACCTGGCGGGAAAAGGAGGCTGCGCTGCAGGCCCGCCTGGCCAAACGGTTGCGCATTCCGGCCCGGGCGCCGTTGCGCCAGCCATTTCGTTCTGAACCGCTGAAACGCGCATGA
PROTEIN sequence
Length: 362
MSKQTAGNNSTAAPTPAQELLRFLRERGQALSPLLILTHDYPDPDALAAAFALQYLAEEEFGIESRIAFGGVVGRMENKAMVRLLRMPVHPLRTTWLKRFANVALVDTQPAFENNSFPAGRKAAIVIDQHPSATKPNADLALVDPQCSATCVIISQALLLLGKPLPERVATALAYGILTDTLDLYRAERPDVVQTYLQVLHYCDMRTLAKIQNPVRSRNFFETLRNGIQNATLQRSLMVSHLGQVENPDLIAQVAEFLLAYRRTNWCLATGRFHGKLHASLRSSTPDVEAGDILRAAFQNPRQAGGHGQIAGGSCRVGGAATEETWREKEAALQARLAKRLRIPARAPLRQPFRSEPLKRA*