name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_310897_1
unknown
|
Not on your lists |
506..1234
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310897_2
unknown
|
Not on your lists |
comp(1387..1500)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310897_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(1867..3591)
|
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN55_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_4
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
|
Not on your lists |
comp(3648..5123)
|
Glycoside hydrolase, family 28 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZG3_SOLUE
glycoside hydrolase family protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_5
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5134..6240)
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000379F14F
PKD domain-containing protein
Tax=RBG_13_Bacteroidetes_43_22_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_6
R_Omnitrophica_50_24, Omnitrophica, Bacteria
|
Not on your lists |
6613..7698
|
DHH domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein id=12557299 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoesterase RecJ domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria
|
Not on your lists |
7695..8960
|
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUE4_SYNAS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
9172..11610
|
Glycoside hydrolase family 57 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNC4_9BACT
Glycoside hydrolase family 57 {ECO:0000313|EMBL:EEF58677.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycoside hydrolase protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_9
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11607..14099
|
malto-oligosyltrehalose synthase (EC:5.4.99.15)
Malto-oligosyltrehalose synthase {ECO:0000313|EMBL:AEH09935.1}; EC=5.4.99.15 {ECO:0000313|EMBL:AEH09935.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Malto-oligosyltrehalose synthase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B327_FRADG
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_10
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(14162..14944)
|
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037CCC35
Probable glucose 1-dehydrogenase {ECO:0000313|EMBL:EAQ78503.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
glucose dehydrogenase
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
15137..16951
|
Glycoside hydrolase 15-related n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCR8_9BACT
Glycoside hydrolase 15-related {ECO:0000313|EMBL:EEF62264.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycosyl hydrolase, glycosyl hydrolase family 15
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
17095..18861
|
treZ_[H]; Malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase id=4667526 bin=GWF2_Methylomirabilis_70_14 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
18961..20817
|
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase id=4884125 bin=GWC2_Methylomirabilis_70_24 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(20934..25079)
|
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN7_9BACT
rpoC; DNA-directed RNA polymerase subunit beta'
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(25102..29016)
|
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN8_9BACT
rpoB; DNA-directed RNA polymerase subunit beta
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(29220..29606)
|
50S ribosomal protein L7/L12 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN9_9BACT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplL; 50S ribosomal protein L7/L12
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(29789..30301)
|
50S ribosomal protein L10 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP0_9BACT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L10
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(30315..31007)
|
50S ribosomal protein L1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP1_9BACT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplA; 50S ribosomal protein L1
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(31062..31487)
|
50S ribosomal protein L11 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP2_9BACT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplK; 50S ribosomal protein L11
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(31590..32135)
|
Transcription termination/antitermination protein NusG n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP3_9BACT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
nusG; transcription antiterminator NusG
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(32144..32395)
|
Protein translocase subunit SecE n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP4_9BACT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
secE; Preprotein translocase subunit SecE
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_trna_3
unknown
|
Not on your lists |
comp(32491..32577)
|
transferRNA Ser
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_trna_2
unknown
|
Not on your lists |
comp(32593..32665)
|
transferRNA Trp
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(32746..33933)
|
Elongation factor Tu n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP5_9BACT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
elongation factor Tu
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_trna_1
unknown
|
Not on your lists |
comp(33985..34057)
|
transferRNA Thr
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_23
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(34265..35077)
|
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILE8_9BACT
hydrogenase
Tax=GWF2_Verrucomicrobia_62_7_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_24
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(35105..36586)
|
NADH-ubiquinone oxidoreductase chain 49kDa n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILE6_9BACT
hydrogenase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_25
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(36583..38025)
|
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSE2_OPITP
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_26
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(38022..38750)
|
NAD-dependent dehydrogenase subunit n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSU7_DESBD
NAD-dependent dehydrogenase subunit
NAD-dependent dehydrogenase subunit {ECO:0000313|EMBL:ACU90697.1}; Flags: Precursor;; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_310897_27
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(38735..39637)
|
Formate hydrogenlyase subunit 4 n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AQ05_9BACT
NADH dehydrogenase subunit 1
Tax=GWF2_Verrucomicrobia_62_7_curated
|