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berkeley_reactor_200306_planktonic_scaffold_310897_22

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(32746..33933)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor Tu n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFP5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 396.0
  • Bit_score: 657
  • Evalue 7.60e-186
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 396.0
  • Bit_score: 657
  • Evalue 1.10e-185
elongation factor Tu similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 395.0
  • Bit_score: 597
  • Evalue 1.50e-168

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGCCAAAGAGCAATTTCAGAGAACGAAACCGCACGTCAACGTCGGCACCATCGGCCACGTCGACCACGGCAAATCCACGTTGACCGCCGCCATTGTTGCGGTGCAGAACCGCAAAGGCATGGCGCCCTTGATCGAATACAAGGACATCACCAAGGGCGGCACGGTTCGTGACGAAACCAAGACTGTGACCATTGCCGTGTCGCACGTCGAATATGAGTCTCCCAAACGCCATTACGCGCACGTTGACTGCCCCGGCCACGCTGACTATGTGAAAAACATGATCACCGGTGCCGCCCAGATGGATGGTGCGATTCTGGTGGTGAGCGCCGCTGACGGTCCCATGCCGCAGACGCGCGAACACATCCTGCTCGCCCGCCAGGTCGGCGTGCCCAGCATCATTGTTTGCCTGAACAAGGTGGACCTCGCGGACGCGGACTTGCTTGAGTTGATCGAAATGGAAATCCGTGAGTTGCTCACGAAATATGGTTTCCCGGGCGATACGACCCCGATCATTCGCGCTTCGGCCACGGCTGCTTTGGCCGGCAAGCCCGAGGGCGAGAAGGCGATTGCTGATTTGCTCGACGCGCTGGACAGCTTCATCCCTGACCCGACCCGCGAAGTGGACAAGCCGTTCCTCATGTGCGTGGAAGACGTGTTCACGATTGAAGGTCGCGGCACGGTTGTGACCGGTCGCGTGGAGCGCGGTGTGCTGAAGAAGATGGAAGAAGTCGAAATCGTCGGTCTGCGTGACACGCGCAAGACGGTGGCGACGGACATCGAAATGTTCCGCAAGTTGCTCGACAGCGCCAGCGCTGGTGACAACGTCGGAGTGCTGCTGCGCGGCGTCACCAAGACCGATGTGGAACGCGGCATGGTTTTGGCCAAGCCCGGCTCCATTACTCCGCATACCAAGTTCAAGGCGGAAGTCTATGTTTTGACCAAGGATGAAGGTGGTCGTCATACGCCCTTCTTCACCAACTATCGTCCGCAATTCTATTTCCGCACCTCGGACGTCACCGGCACGCTCACGCTGCCGCAGGGTGTCGAAATGGTGATGCCGGGCGACAACGTCTCGGTCACCGTTGAGTTGCAGAAGTCGGTTGCGATGGAGAAAGGTCTCAAGTTCGCGATCCGCGAAGGCGGCCGCACCATCGGCTCCGGCATTGTGACGGAAGTCATCGCCTAA
PROTEIN sequence
Length: 396
MAKEQFQRTKPHVNVGTIGHVDHGKSTLTAAIVAVQNRKGMAPLIEYKDITKGGTVRDETKTVTIAVSHVEYESPKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPSIIVCLNKVDLADADLLELIEMEIRELLTKYGFPGDTTPIIRASATAALAGKPEGEKAIADLLDALDSFIPDPTREVDKPFLMCVEDVFTIEGRGTVVTGRVERGVLKKMEEVEIVGLRDTRKTVATDIEMFRKLLDSASAGDNVGVLLRGVTKTDVERGMVLAKPGSITPHTKFKAEVYVLTKDEGGRHTPFFTNYRPQFYFRTSDVTGTLTLPQGVEMVMPGDNVSVTVELQKSVAMEKGLKFAIREGGRTIGSGIVTEVIA*