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berkeley_reactor_200306_planktonic_scaffold_310897_66

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(105681..106730)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EQU8_CORAD similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 326.0
  • Bit_score: 316
  • Evalue 2.80e-83
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 326.0
  • Bit_score: 316
  • Evalue 7.90e-84
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 342.0
  • Bit_score: 342
  • Evalue 3.90e-91

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Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1050
ATGTCCTCGCGCCCAATTTATCGCATCGGTGGCAAACGCTACGGGATTGACACCTGTGAGCCGCAGCGGGAGGCGGTGCGCGAAGGGAAGATTGAATTTCACGCCCTGACCAAGGGACATTACCCCGGCATCCTGATGCCCAAAGACGTGTTGCCGGGACTGAACAGCATCGGTTTTTGGGACGCCAACACGTCGCAGGATTGGGGGCTGGACGCGCACCGCAACGAAGGGATCAAGATTGTTTTCTTTGAAACCGGAACCTGCGATTTGCTGATGGGCAACAAAACGTATCATCTGCACGCGGGCAATTTTCTGCTCACCCGCCCTTGGCAACTGCACAAGTTCGGCAACCCGAACATTGGCCGGGGACGGTTGCACTGGTTGATCCTGGACGTCGGGGTGAGACGCCCGCATCAGGAGTGGCACTGGCCCAAGTGGATGGTCATGACCCGGGAAAATCTCGCGGAACTCACGGAGCGCTGGCAGCACCTCAAGCATCCCATCTGGACCTCCACGCCCGCCATCGCGCAATCGTTTCGCGAACTGGCCAGGTGCATTACCGCCTGGGACAAGCCGCATTCGGTTTCGCGCATGGCCGTCCACCTGAACCTGCTGCTGATCAGCGTTCTCGACGCGCTGGTGGAACAGCAGGTGCAGGTCAGCGAACATCTGACCTCGCGCAAGCATGCGGTTGAAGTTTTCTTTCAAGACCTGCGAAACGGCCGGATTGACCTGGGCGAGCAATGGACGCTGGAGCGCATGGCGTCCCACTGCCATTTGGGCATGACGGCCTTTTCGCAATACTGCCGGGAACTGGTGAACATCGGCCCGATGGAATACCTGAACCAGTGCCGGTTGGAGCAGGCGGCGCAGCAGTTGCGCACGCGGCCCGAGCTTTCGGTCACCGAGATCGCCTTTGCGAACGGTTTCAACTCCAGCCAGTATTTCGCGACGCGGTTTCGCCGCCATTTCAAACTTGCCCCCAGCCAATATGTCTCCCGGCTGAATGGAACGGCGGCTGCCAAAGATGGAGCGGCGCGTAATTTTTGA
PROTEIN sequence
Length: 350
MSSRPIYRIGGKRYGIDTCEPQREAVREGKIEFHALTKGHYPGILMPKDVLPGLNSIGFWDANTSQDWGLDAHRNEGIKIVFFETGTCDLLMGNKTYHLHAGNFLLTRPWQLHKFGNPNIGRGRLHWLILDVGVRRPHQEWHWPKWMVMTRENLAELTERWQHLKHPIWTSTPAIAQSFRELARCITAWDKPHSVSRMAVHLNLLLISVLDALVEQQVQVSEHLTSRKHAVEVFFQDLRNGRIDLGEQWTLERMASHCHLGMTAFSQYCRELVNIGPMEYLNQCRLEQAAQQLRTRPELSVTEIAFANGFNSSQYFATRFRRHFKLAPSQYVSRLNGTAAAKDGAARNF*