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berkeley_reactor_200306_planktonic_scaffold_310897_80

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(123893..124567)

Top 3 Functional Annotations

Value Algorithm Source
hydrolase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174601C similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 224.0
  • Bit_score: 419
  • Evalue 2.00e-114
Isochorismatase hydrolase {ECO:0000313|EMBL:EEF58436.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 224.0
  • Bit_score: 418
  • Evalue 4.70e-114
putative isochorismatase similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 224.0
  • Bit_score: 401
  • Evalue 1.20e-109

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 675
ATGTCCAACTATCACAAACTCTACACGCCCGAAGACAGCGCCGTCGTTTTTATTGACCATCAACCGCAGATGACGTTTGGCGTGGCGAACACGGATCGGGCCACGCTCATCAACAATGTCACGCTGCTCGCCAAAGTCGCCAAGGAATTCAACGTCCCGGCGGTGCTCACCGCCGTGGAAACCGAATCGTTCAGCGGTTACGTCTGGCCGCAGTTACTCGATGTATTTCCCGGCCAGGCGGTCGTCGAACGCAGTTCCATGAACTCGTGGGACGATGCCGGTTTCCGCAAAGCCATAGAAGCCACCGGGCGCAAAAACATCATCATGACCGGGCTTTGGACCGAAGTCTGCGTCACCTGGCCGACCATTGAAATGCTCGGCGCGGGCTACAACATTTACGTCGTGGAAGATTGTTGCGGCGCTACTTCGCCGGCCGCGCAGGAAGCCGCGCTTTCGCGCATGGTGCAGGCCGGTGCGGTGCGGTTGACGACCATTGCCGCATTGTTGGAATGGCAGCGCGACTGGGCCAAGCGCGATCATTACAACAATCTCATGGGCTTGCTCAAGCAACAGGCCGGAGCTTACGGCGTCGGTGTGGAATACGCCTACACGATGGTGCATCACGCGCCGCAATCCGCGCAAAAGCCGCAGATTGTGCCGGAAAAAGCCCACTGA
PROTEIN sequence
Length: 225
MSNYHKLYTPEDSAVVFIDHQPQMTFGVANTDRATLINNVTLLAKVAKEFNVPAVLTAVETESFSGYVWPQLLDVFPGQAVVERSSMNSWDDAGFRKAIEATGRKNIIMTGLWTEVCVTWPTIEMLGAGYNIYVVEDCCGATSPAAQEAALSRMVQAGAVRLTTIAALLEWQRDWAKRDHYNNLMGLLKQQAGAYGVGVEYAYTMVHHAPQSAQKPQIVPEKAH*