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berkeley_reactor_200306_planktonic_scaffold_4941_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 8939..9511

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5BR03_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 157.0
  • Bit_score: 60
  • Evalue 1.20e-06
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EIM72005.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalkaliphila LW7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 157.0
  • Bit_score: 60
  • Evalue 1.60e-06

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Taxonomy

Nitritalea halalkaliphila → Nitritalea → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGTGCAAAAACATATGCCCTAAATTATTGGGATGTGTCTTGTTGTATATTTTATATCAGAGCAGCGAATACATCAAAGAACTGGTGCTAAACTGGATGGACTTTAATGCCCGTCAGTACGACCCGCAGATCGGTAGGTTCCTGGGTGTAGATCCTTTAGCAGTGCGTGGAGGCCAGGATATGTTCTCGCCTTATGCAGCGATGGGTAATGCGCCGGAGAGTATGGTGGATCCGAATGGGATGCAGTATAGGAGCCCCAACGGCTATCAGAATGTAAAAGAAATTGGGGGAGATGCAGCGCGTCGGAAATCACCTTTTCAGGATATCTTTGGTGGCGGTGGCGCTTTTGGGCTTGGCGGACCAAATGCGACTCAACGGGTGGGTGAGGCTGGGTCTAGTAAAGCTTCAAATGCTGCGTTCTGGAGGGAGACCGAATATCAACTAGGGCGTATAACGGGTGAAGTACCATTGTACAACCAGGGTGATGGCACCTTTAGTAACTTCAAGCCGCGATCTGGAGAGAAAGACGGTGATGGAGCTTTTGATAGAACATCAGAGTTGGCGGGAGTTTAG
PROTEIN sequence
Length: 191
MCKNICPKLLGCVLLYILYQSSEYIKELVLNWMDFNARQYDPQIGRFLGVDPLAVRGGQDMFSPYAAMGNAPESMVDPNGMQYRSPNGYQNVKEIGGDAARRKSPFQDIFGGGGAFGLGGPNATQRVGEAGSSKASNAAFWRETEYQLGRITGEVPLYNQGDGTFSNFKPRSGEKDGDGAFDRTSELAGV*