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berkeley_reactor_200306_planktonic_scaffold_4941

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_4941_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..1393
DNA (1392bp) protein (464aa)
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDE1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93928.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RHS repeat-associated core domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_4941_2
unknown

Not on your lists

1393..2016
DNA (624bp) protein (208aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2638..4950
DNA (2313bp) protein (771aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFH6_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61681.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_4941_4
unknown

Not on your lists

5023..5637
DNA (615bp) protein (205aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6015..7442
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFH6_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61681.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_4941_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7449..8108
DNA (660bp) protein (220aa)
RHS repeat-associated core domain protein id=2000863 bin=GWD2_Bacteroidetes_40_43 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
berkeley_reactor_200306_planktonic_scaffold_4941_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8112..8573
DNA (462bp) protein (154aa)
Putative uncharacterized protein id=4151322 bin=GWF2_Bacteroidetes_40_13 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
berkeley_reactor_200306_planktonic_scaffold_4941_8
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8939..9511
DNA (573bp) protein (191aa)
RHS repeat-associated core domain protein n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5BR03_9BACT
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EIM72005.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalkaliphila LW7.;"
berkeley_reactor_200306_planktonic_scaffold_4941_9
unknown

Not on your lists

9811..10194
DNA (384bp) protein (128aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_10
unknown

Not on your lists

10578..11117
DNA (540bp) protein (180aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_11
unknown

Not on your lists

11089..11280
DNA (192bp) protein (64aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_12
unknown

Not on your lists

11292..11510
DNA (219bp) protein (73aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_13
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11867..12280
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM36896.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
berkeley_reactor_200306_planktonic_scaffold_4941_14
unknown

Not on your lists

12586..13026
DNA (441bp) protein (147aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_15
unknown

Not on your lists

13275..13868
DNA (594bp) protein (198aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_16
unknown

Not on your lists

14314..14844
DNA (531bp) protein (177aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_17
unknown

Not on your lists

15151..15465
DNA (315bp) protein (105aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_18
unknown

Not on your lists

15818..16279
DNA (462bp) protein (154aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_19
unknown

Not on your lists

16405..16671
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003656AED
berkeley_reactor_200306_planktonic_scaffold_4941_20
unknown

Not on your lists

16812..17414
DNA (603bp) protein (201aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_21
unknown

Not on your lists

17555..18058
DNA (504bp) protein (168aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_22
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18055..18306
DNA (252bp) protein (84aa)
filamentous haemagglutinin family outer membrane protein
Filamentous haemagglutinin family outer membrane protein {ECO:0000313|EMBL:BAP29201.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
berkeley_reactor_200306_planktonic_scaffold_4941_23
unknown

Not on your lists

18497..18850
DNA (354bp) protein (118aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_24
unknown

Not on your lists

18954..19199
DNA (246bp) protein (82aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_25
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19207..19452
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI000369BB93
Uncharacterized protein {ECO:0000313|EMBL:KJS06925.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
berkeley_reactor_200306_planktonic_scaffold_4941_26
unknown

Not on your lists

19471..19980
DNA (510bp) protein (170aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_27
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20169..20627
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029B0DF6
Uncharacterized protein {ECO:0000313|EMBL:KIC63228.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_4941_28
unknown

Not on your lists

20769..21236
DNA (468bp) protein (156aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_29
unknown

Not on your lists

21466..21843
DNA (378bp) protein (126aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_4941_30
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21854..22471
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5F9T4_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ08037.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
Displaying items 1-30 of 135 in total

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