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berkeley_reactor_200306_planktonic_scaffold_26155_92

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 116174..116734

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 185.0
  • Bit_score: 279
  • Evalue 2.20e-72
Peptidyl-tRNA hydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSZ3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 185.0
  • Bit_score: 279
  • Evalue 1.50e-72
peptidyl-tRNA hydrolase similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 185.0
  • Bit_score: 279
  • Evalue 4.40e-73

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGAAATACTTAATTGTAGGACTGGGAAATATTGGTGCGGAATACGACAGCACCCGGCATAATATTGGTTTTGATGTGGCCGATGCATTTGTGATCAAACATGGCGGCAACTTTAAAGTAGACCGGCTGGCGGCCGTTTCGGAAGTTAAATGGAAAGGCAAAACATTTGTAGTGATTAAGCCGACCACCTATATGAACCTGAGCGGTAAAGCCGTGAAATACTGGCTGGATAAGGAAAAGATACCGGTAGAAAATATGCTGGTGATCGTAGACGACCTGGCCCTGCCCATTGAAAGTCTGCGGGTACGTGCTTCGGGCACCCATGCGGGGCACAACGGTCTGCGCGATATCCAGGCGGTGCTGAACAGTACGGCTTACCCGCGGCTGCGTTTCGGGGTGGGCAACAATTTTCCGAAAGGCAGGCAGGTCGATTTTGTATTGGGCCGCTGGCAGCCCGACGAGATGCCTTATGTAAAAGATAAGGTGCTGCAGTCGGTAGAGATTATTGAAAGCTTTGCCACGATTGGTCTTGAACGTACCATGAATACCTTTAATAAATAA
PROTEIN sequence
Length: 187
MKYLIVGLGNIGAEYDSTRHNIGFDVADAFVIKHGGNFKVDRLAAVSEVKWKGKTFVVIKPTTYMNLSGKAVKYWLDKEKIPVENMLVIVDDLALPIESLRVRASGTHAGHNGLRDIQAVLNSTAYPRLRFGVGNNFPKGRQVDFVLGRWQPDEMPYVKDKVLQSVEIIESFATIGLERTMNTFNK*