name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_26155_89
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(110792..112294)
|
amino acid/peptide transporter (EC:3.1.3.1)
Amino acid/peptide transporter n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1W0_PEDHD
Amino acid transporter {ECO:0000313|EMBL:ETZ21017.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
|
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berkeley_reactor_200306_planktonic_scaffold_26155_90
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(112418..114172)
|
Proton-dependent di-tripeptide transporter n=3 Tax=Elizabethkingia RepID=H0KNV9_9FLAO
Di-/tripeptide transporter
Amino acid transporter {ECO:0000313|EMBL:KFC32996.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
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berkeley_reactor_200306_planktonic_scaffold_26155_91
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(114307..115983)
|
Amino acid/peptide transporter (Peptide:H+ symporter) n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1M674_9FLAO
Amino acid/peptide transporter (Peptide:H+ symporter) {ECO:0000313|EMBL:EKB57828.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
dtpT_3; Di-/tripeptide transporter
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_92
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
116174..116734
|
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Peptidyl-tRNA hydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSZ3_CHIPD
peptidyl-tRNA hydrolase
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_93
unknown
|
Not on your lists |
comp(116847..116993)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_26155_94
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
117071..118693
|
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI5_NIAKG
Peptidase M1 {ECO:0000313|EMBL:KIC92915.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Peptidase M1 membrane alanine aminopeptidase
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_95
unknown
|
Not on your lists |
comp(119215..120345)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_26155_96
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(120355..120918)
|
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00235.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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berkeley_reactor_200306_planktonic_scaffold_26155_97
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
121049..121525
|
GCN5-related N-acetyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTB1_9SPHI
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:AHF16795.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_98
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria
|
Not on your lists |
121597..122349
|
Alpha/beta hydrolase fold protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMK1_CHIPD
alpha/beta hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_99
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
122547..123209
|
CBS domain containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMK2_CHIPD
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ACU58546.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
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berkeley_reactor_200306_planktonic_scaffold_26155_100
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
123230..123985
|
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPA0_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU60536.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_101
unknown
|
Not on your lists |
124128..125039
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_26155_102
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
125047..125559
|
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CIP 101113 RepID=H1H6G4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KHA80065.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_103
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(125567..126571)
|
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374E4D0
luciferase-like monooxygenase
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACT92340.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_104
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
126765..129164
|
TonB-dependent receptor n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFN9_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:CCH52714.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_105
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
129452..130423
|
Putative virion core protein (Lumpy skin disease virus)-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAU3_FLAJ1
virion core protein (lumpy skin disease virus)-like protein
Putative virion core protein (Lumpy skin disease virus)-like protein {ECO:0000313|EMBL:ABQ07676.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_106
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
130423..130665
|
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAU4_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ07677.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_107
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
130674..131618
|
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KP21_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF05486.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_108
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
131639..132613
|
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J0RLH2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF05485.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_109
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(133140..133775)
|
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG98_CHIPD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU59830.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_110
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(133914..134690)
|
DNA polymerase III epsilon subunit-like 3'-5' exonuclease n=2 Tax=Alistipes RepID=I3YQS3_ALIFI
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIC90229.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA polymerase III subunit epsilon-like 3'-5' exonuclease
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_111
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
134831..135334
|
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2Z8_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95711.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_112
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
135406..136875
|
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Y9_NIAKG
inosine-5'-monophosphate dehydrogenase
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_113
unknown
|
Not on your lists |
comp(137084..137374)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_26155_114
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(137365..137724)
|
HxlR family transcriptional regulator n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CNE0_ELIME
yybR_7; putative HTH-type transcriptional regulator YybR
Putative HTH-type transcriptional regulator YybR {ECO:0000313|EMBL:AJW63499.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
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berkeley_reactor_200306_planktonic_scaffold_26155_115
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
137846..138793
|
qorA; Quinone oxidoreductase 1 (EC:1.6.5.5)
Quinone oxidoreductase-like protein At1g23740, chloroplastic n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GNY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETZ23052.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_116
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(139287..139883)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBI9_CHIPD
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU63053.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
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berkeley_reactor_200306_planktonic_scaffold_26155_117
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(139954..140592)
|
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035FEEC2
Contig104, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75350.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
methyltransferase family protein
|
|
berkeley_reactor_200306_planktonic_scaffold_26155_118
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(140697..141551)
|
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F3733
AraC family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
|