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berkeley_reactor_200306_planktonic_scaffold_26155_118

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(140697..141551)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F3733 similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 286.0
  • Bit_score: 256
  • Evalue 2.80e-65
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 284.0
  • Bit_score: 239
  • Evalue 1.00e-60
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 285.0
  • Bit_score: 283
  • Evalue 1.80e-73

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 855
ATGGAAAAAATCCCGGTCCGCACCCTGCAATCCAAGGCTATACCTGCTAATCCCGGAGACTTCCGGGTCCTGCAGATAAGAATCTTACCCGGCGAAGCGGATATGGTGCAGCCCCTGCACCGGCATGATTTCTATTATATCCTGGCAATCGAAAAAGGCTCAGGCCTGCATGAAATAGACTTTACAACTTATACCGTCCAGGATCGATCCTTGTTTTTTATGCGGCCCGGCCAGGTGCATCAATTGCAGCTCCATGCAGGCACGCAGGGTTACCTGCTCCAGTTCCCGGCCGCCTTCTATTACCCCGACCAGCCCGCAAGCCGTATACGCCTGCGGAAAGCCGCCACCATCAATGCCTGCACCTGTGCCCCCGCACAGTTTGCCCCCTTACAATATGCCCTTGAAACGTTATGGCAGGAGTATAACAACCGGCAGGAGGATTTTGCCGAAATGATCAAAGCCCAATTGTCCGTTTTCCTGGTTGGACTGATCCGCCTGCAGGACGCGCATCCGGACCGCGGCAGCTCGTACCAGCAGGAACAATCGGAAGCTTTCCTGGACCTGCTGGAACAACATATAACCACGCATAAACAGGCCGGTCAATATGCAACCCTACTCCACCTGTCCGGCGCGCAATTAAGCACTATTACCCAAACGATACTGGGTAAAACACCCTCGGCGCTTATCCGCGACCAGGTGATCCTTGAAGCCAGGCGACGCTTACTCGCTACTTCGCGCCAGGTCGGCCAGGTAGCAGACGATCTCGGTTATGAAGACGTATCCTATTTTATAAGACTGTTCCGGAAGCATACCGGTTATACGCCCGAAGCCTTTCGCAGGCAGCGCGGTGGTTAA
PROTEIN sequence
Length: 285
MEKIPVRTLQSKAIPANPGDFRVLQIRILPGEADMVQPLHRHDFYYILAIEKGSGLHEIDFTTYTVQDRSLFFMRPGQVHQLQLHAGTQGYLLQFPAAFYYPDQPASRIRLRKAATINACTCAPAQFAPLQYALETLWQEYNNRQEDFAEMIKAQLSVFLVGLIRLQDAHPDRGSSYQQEQSEAFLDLLEQHITTHKQAGQYATLLHLSGAQLSTITQTILGKTPSALIRDQVILEARRRLLATSRQVGQVADDLGYEDVSYFIRLFRKHTGYTPEAFRRQRGG*