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berkeley_reactor_200306_planktonic_scaffold_26155

Search features with annotation key words

Displaying items 121-150 of 351 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_26155_119
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

142014..142880
DNA (867bp) protein (289aa)
besA_2; Ferri-bacillibactin esterase BesA (EC:3.1.-.-)
Esterase n=2 Tax=Elizabethkingia meningoseptica RepID=R9CHX4_ELIME
Esterase {ECO:0000313|EMBL:KFF17320.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
berkeley_reactor_200306_planktonic_scaffold_26155_120
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(142967..143713)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVK9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93067.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_121
unknown

Not on your lists

comp(143719..143988)
DNA (270bp) protein (90aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_122
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

144099..144860
DNA (762bp) protein (254aa)
Transcriptional regulator, LuxR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA39_FLUTR
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIA94213.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_26155_123
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

144924..145688
DNA (765bp) protein (255aa)
Transcriptional regulator, AraC family n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PPW6_MURRD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEM71544.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
berkeley_reactor_200306_planktonic_scaffold_26155_124
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

145766..146422
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003622211
Uncharacterized protein {ECO:0000313|EMBL:EZH71950.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_125
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

146546..147991
DNA (1446bp) protein (482aa)
Peptidase, S41 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W345_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC94514.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase s41
berkeley_reactor_200306_planktonic_scaffold_26155_126
unknown

Not on your lists

comp(149031..149450)
DNA (420bp) protein (140aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_127
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149404..150033)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Enterovibrio calviensis RepID=UPI0002D9FDC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGW52563.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
berkeley_reactor_200306_planktonic_scaffold_26155_128
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(150052..150519)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002D8044D
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
berkeley_reactor_200306_planktonic_scaffold_26155_129
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(150512..152281)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H1S4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CEN46672.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
UBA/THIF-type NAD/FAD binding protein
berkeley_reactor_200306_planktonic_scaffold_26155_130
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152268..153320)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DEE143
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
berkeley_reactor_200306_planktonic_scaffold_26155_131
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153329..154336)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002ED8188
Patatin-like phospholipase {ECO:0000313|EMBL:CEN46664.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
patatin-like phospholipase
berkeley_reactor_200306_planktonic_scaffold_26155_132
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

154596..155927
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YE99_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ26162.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_133
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

156044..157183
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KLT7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL74018.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_134
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

157991..158155
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035DD647
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17351.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_26155_135
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(158209..159279)
DNA (1071bp) protein (357aa)
Beta-ketoacyl-acyl-carrier-protein synthase I n=1 Tax=Niabella soli DSM 19437 RepID=H1NM52_9SPHI
3-oxoacyl-ACP synthase
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHF14734.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_26155_136
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

159564..160616
DNA (1053bp) protein (351aa)
Fatty acid desaturase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPG0_9SPHI
fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:AHF15017.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_26155_137
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

161360..161713
DNA (354bp) protein (118aa)
response regulator receiver n=1 Tax=Pedobacter agri RepID=UPI00029AA0C8
Uncharacterized protein {ECO:0000313|EMBL:KEQ31556.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
response regulator receiver protein
berkeley_reactor_200306_planktonic_scaffold_26155_138
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

162009..162191
DNA (183bp) protein (61aa)
Response regulator receiver domain protein n=1 Tax=Prevotella disiens JCM 6334 = ATCC 29426 RepID=U2KP45_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIA91053.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
response regulator of the LytR/AlgR family
berkeley_reactor_200306_planktonic_scaffold_26155_139
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

162425..163723
DNA (1299bp) protein (433aa)
Putative secreted protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBE6_SPHS2
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ADZ77394.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
berkeley_reactor_200306_planktonic_scaffold_26155_140
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

163857..164546
DNA (690bp) protein (230aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP63_CHIPD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACU60499.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_26155_141
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

164552..165037
DNA (486bp) protein (162aa)
Thioredoxin domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7A3_NIAKG
thioredoxin domain-containing protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:AEW00128.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_26155_142
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

165153..165995
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7A5_NIAKG
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEW00130.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_26155_143
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(166136..166306)
DNA (171bp) protein (57aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUF4_EMTOG
putative transcriptional regulator, Crp/Fnr family
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:BAP30954.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
berkeley_reactor_200306_planktonic_scaffold_26155_144
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

166598..167317
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EF92_9SPHI
Contig70, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76195.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_145
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

167604..167795
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV65_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:CDT01554.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_146
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

167817..170549
DNA (2733bp) protein (911aa)
DNA ligase D n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCA5_9SPHI
DNA ligase D {ECO:0000313|EMBL:EHQ30096.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
DNA ligase D
berkeley_reactor_200306_planktonic_scaffold_26155_147
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

170612..170911
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KP39_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF13325.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_148
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(171150..172502)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037B77C5
Uncharacterized protein {ECO:0000313|EMBL:KFF11168.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
Displaying items 121-150 of 351 in total

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