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berkeley_reactor_200306_planktonic_scaffold_26155_123

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 144924..145688

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PPW6_MURRD similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 253.0
  • Bit_score: 251
  • Evalue 6.10e-64
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 253.0
  • Bit_score: 251
  • Evalue 1.70e-64
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEM71544.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 253.0
  • Bit_score: 251
  • Evalue 8.60e-64

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Taxonomy

Muricauda ruestringensis → Muricauda → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 765
ATGATATACGAAATAATACCGCCCTGTGCGGCATTAAGGGATACGGTGAGCCACTTCTGGACGGGCAGCTGGGATGCAGGCCGGCAGCCCAATACAACCTATTTCGTTATCGCCGGCACCTGTACGGAACTTACTTTCGCATTTAGTGGCGGCGATCAGCCGGAGGCGCTGCAGTTCGCCTTGCTACAGGGACATACGCAACGGCCCGATCAACGTTCCGTAGCCGGGTTTCATCACCTGCTGGGCGTATCGATATACGCGCATGCAGTGCCCAGGCTTTTTGGCGTACCGGCCGCAACACTCAGCAACCAGGTTATTACCCTGGAGACCTTAATGGGTATTGATGGCAGGCTGTTATCCGAAAAGATGGCCGCTGCCACGACCACAGCAGAACGTATAACCCTGCTAACGACTTTTTTCCTGTCGATAAAAAATAGCCTGCAACAAGACCTGCTTATGATCGACGCTATCGGGCTTATAAAGAACAGTAAGGGCAGGGTAGGGGTAGATACGCTGGCCCGGGATTTTTGCTTGTCTGAAAAACAATTCGGCAGGCGCTTCAAAGCCGCTGCAGGCTTTAACCCTAAGACCTTTGCCCGGATCGTGCGTTTCGAATCCGTGTTGCAGGATTGTATGAGCTCCTCCCGGCTTACCGGCACGGCTTACGATCATGGTTATTACGACCAGGCTCATTTTATCCACGAATTCAGAACGTTCTCCATGTTTACCCCCGGTGATTTCCGCAGGCTGGGCGCGGCGCAATAA
PROTEIN sequence
Length: 255
MIYEIIPPCAALRDTVSHFWTGSWDAGRQPNTTYFVIAGTCTELTFAFSGGDQPEALQFALLQGHTQRPDQRSVAGFHHLLGVSIYAHAVPRLFGVPAATLSNQVITLETLMGIDGRLLSEKMAAATTTAERITLLTTFFLSIKNSLQQDLLMIDAIGLIKNSKGRVGVDTLARDFCLSEKQFGRRFKAAAGFNPKTFARIVRFESVLQDCMSSSRLTGTAYDHGYYDQAHFIHEFRTFSMFTPGDFRRLGAAQ*