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berkeley_reactor_200306_planktonic_scaffold_26155_137

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 161360..161713

Top 3 Functional Annotations

Value Algorithm Source
response regulator receiver n=1 Tax=Pedobacter agri RepID=UPI00029AA0C8 similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 117.0
  • Bit_score: 103
  • Evalue 9.50e-20
Uncharacterized protein {ECO:0000313|EMBL:KEQ31556.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 116.0
  • Bit_score: 106
  • Evalue 1.60e-20
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 117.0
  • Bit_score: 102
  • Evalue 6.00e-20

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 354
ATGAAACGAAAGCAAGTAGCCATCGTTGAAGACGATTATGATCTCAGGGAAGTTATCGCCCTGATTCTCGAAAACGAGCTGTATACAATCAAGTTATTACCCAACGCCTTTATGTTTAATCGGTATATAAAAGAGCATACCCCTGACCTTATCCTATTGGATGTAATGTTGCCTGATGGCAACGGCATTAAAATATGTCAGGAATTAAAAAGTAATCCCCGAACGCAGCAAATTCCAGTTTTGCTGATGTCAGCAAATACCGAACTTAAACCAGGAGACGGAGGTGCGAGTGACGCCATCAAAAAGCCTTTTGACATCGCGGAACTCAGGCAAAAAGTGGCACAATATCTTTGA
PROTEIN sequence
Length: 118
MKRKQVAIVEDDYDLREVIALILENELYTIKLLPNAFMFNRYIKEHTPDLILLDVMLPDGNGIKICQELKSNPRTQQIPVLLMSANTELKPGDGGASDAIKKPFDIAELRQKVAQYL*