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berkeley_reactor_200306_planktonic_scaffold_26155

Search features with annotation key words

Displaying items 151-180 of 351 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_26155_149
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(172534..173853)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein id=1852856 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
putative hemolysin secretion protein
Tax=GWF2_Bacteroidetes_35_48_curated
berkeley_reactor_200306_planktonic_scaffold_26155_150
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(173863..176049)
DNA (2187bp) protein (729aa)
ABC transporter ATP-binding protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JP99_9BACT
ABC transporter ATP-binding protein
Tax=GWA2_Bacteroidetes_31_9b_curated
berkeley_reactor_200306_planktonic_scaffold_26155_151
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(176069..177160)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003478C92
Uncharacterized protein {ECO:0000313|EMBL:KFF11171.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_152
unknown

Not on your lists

comp(177153..177374)
DNA (222bp) protein (74aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_153
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(177378..178346)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI0002889821
Uncharacterized protein {ECO:0000313|EMBL:ETN96131.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_154
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(178358..179338)
DNA (981bp) protein (327aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF11173.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
berkeley_reactor_200306_planktonic_scaffold_26155_155
unknown

Not on your lists

comp(179468..179689)
DNA (222bp) protein (74aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_156
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(180135..182162)
DNA (2028bp) protein (676aa)
UPI00028938B9 related cluster id=3464937 bin=GWC1_Spirochaetes_27_15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
Tax=GWF2_Bacteroidetes_43_11_curated
berkeley_reactor_200306_planktonic_scaffold_26155_157
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(182152..183561)
DNA (1410bp) protein (470aa)
Peptidase S41 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT71_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIA96915.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
peptidase S41
berkeley_reactor_200306_planktonic_scaffold_26155_158
unknown

Not on your lists

comp(183656..183862)
DNA (207bp) protein (69aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_159
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

184326..185156
DNA (831bp) protein (277aa)
DNA gyrase inhibitor n=1 Tax=Cecembia lonarensis LW9 RepID=K1LGI2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KEY19601.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_160
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

185655..187130
DNA (1476bp) protein (492aa)
Transcriptional regulator, GntR family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EA07_9SPHI
Transcriptional regulator, GntR family protein {ECO:0000313|EMBL:EDM37988.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
GntR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_26155_161
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(187208..187951)
DNA (744bp) protein (248aa)
NmrA family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W353_DYAFD
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ACT92157.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
berkeley_reactor_200306_planktonic_scaffold_26155_162
unknown

Not on your lists

comp(188192..188416)
DNA (225bp) protein (75aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_163
unknown

Not on your lists

comp(188486..188608)
DNA (123bp) protein (41aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_164
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

188645..191470
DNA (2826bp) protein (942aa)
lantibiotic dehydratase n=1 Tax=Pedobacter agri RepID=UPI00029A7031
Uncharacterized protein {ECO:0000313|EMBL:KIA96701.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
lantibiotic dehydratase
berkeley_reactor_200306_planktonic_scaffold_26155_165
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

191676..192920
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381D8E1
lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
berkeley_reactor_200306_planktonic_scaffold_26155_166
unknown

Not on your lists

193119..193676
DNA (558bp) protein (186aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_167
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

193984..194358
DNA (375bp) protein (125aa)
DoxX family protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5S7_HERA2
Uncharacterized protein {ECO:0000313|EMBL:KFF12911.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
DoxX family protein
berkeley_reactor_200306_planktonic_scaffold_26155_168
Microscilla sp. PRE1, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(194535..196094)
DNA (1560bp) protein (520aa)
transposase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559234
MS156, putative transposase {ECO:0000313|EMBL:AAK62878.1}; TaxID=155537 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla sp. PRE1.;"
transposase, is4 family
berkeley_reactor_200306_planktonic_scaffold_26155_169
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(196418..197497)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3ICW5_9BACI
Uncharacterized protein {ECO:0000313|EMBL:CDT29131.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_170
Leptospira borgpetersenii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

197602..198858
DNA (1257bp) protein (419aa)
PF14082 domain protein n=1 Tax=Leptospira santarosai str. HAI1380 RepID=M6ZAI1_9LEPT
hypothetical protein
PF14082 domain protein {ECO:0000313|EMBL:EMJ80862.1}; TaxID=1303729 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira borgpetersenii serovar Hardjo-bovis str. Sponselee.;"
berkeley_reactor_200306_planktonic_scaffold_26155_171
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(198874..199887)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI000289FD8F
Uncharacterized protein {ECO:0000313|EMBL:CCU80955.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_26155_172
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(200067..200771)
DNA (705bp) protein (235aa)
LytTR family two component transcriptional regulator n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LH33_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD03577.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
berkeley_reactor_200306_planktonic_scaffold_26155_173
unknown

Not on your lists

comp(200774..201721)
DNA (948bp) protein (316aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_174
unknown

Not on your lists

201945..202085
DNA (141bp) protein (47aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_175
unknown

Not on your lists

202592..202924
DNA (333bp) protein (111aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_26155_176
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(202995..203660)
DNA (666bp) protein (222aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1R3_PEDHD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACU05055.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
berkeley_reactor_200306_planktonic_scaffold_26155_177
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(203675..205036)
DNA (1362bp) protein (454aa)
RagB/SusD domain-containing protein n=1 Tax=Pedobacter agri RepID=UPI00029A29FD
Uncharacterized protein {ECO:0000313|EMBL:KIC89849.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RagB/SusD domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_26155_178
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(205047..208397)
DNA (3351bp) protein (1117aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter agri RepID=UPI00029B278F
Uncharacterized protein {ECO:0000313|EMBL:KEQ28232.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
TonB-dependent receptor plug
Displaying items 151-180 of 351 in total

View Taxonomy