ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_26155_176

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(202995..203660)

Top 3 Functional Annotations

Value Algorithm Source
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1R3_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 161.0
  • Bit_score: 132
  • Evalue 2.80e-28
alkyl hydroperoxide reductase similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 161.0
  • Bit_score: 132
  • Evalue 7.80e-29
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACU05055.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 161.0
  • Bit_score: 132
  • Evalue 3.90e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 666
ATGAAAAATGGAACACTGATCGTCAAAGCGGCAATATGCATACTGTTACTTTTGGCTGGCGAACGATTGATAGCACAAAAGAAGCCGATTTTAGAAATTGACCAGCCAATGCCAGACTTTTTACTTCCAGAGGTGCAATACTATGATAAAAGCAGCGTTGCACTTGCGGATTTTAAAGGTAAATGGCTTGTATTGGATTTTTGGAACAGGTATTGCTACGCATGTTTAGTCAGCCATCCCAAAATGGACACCCTTAGAAAAAAGTTTACCAACAAAAACGTAGAAGTAATTTTGGTAGGTTACACGGGATCGCAATACCGCAATGTTTCTGACAATATTGCAACCAGAGAACTTTATGAGCGAAATAGAAAAGCGAACCATCTTTCTATACCTATAGCATACGACTCTGTAATAATGGAAAAATATGGAATCAAACCCACACCCTATATTATAATCGTGGCACCAAATGGATTAATAAAAGCAATTACGACACGTATTACGCAAAGCGAGCTTGACAGGCTTATAACAGGTGATACCGTTAGTTTAAAAAAGGCCTACCTGGCTGGTGAAAGAAGAAAGTTCGAGCAAGATTACGCAGATCAAAATACCTATAGACTTTACAATGAGAAAAACGTGAAATTGATTAGACATAGGTCAAGAACTTAA
PROTEIN sequence
Length: 222
MKNGTLIVKAAICILLLLAGERLIAQKKPILEIDQPMPDFLLPEVQYYDKSSVALADFKGKWLVLDFWNRYCYACLVSHPKMDTLRKKFTNKNVEVILVGYTGSQYRNVSDNIATRELYERNRKANHLSIPIAYDSVIMEKYGIKPTPYIIIVAPNGLIKAITTRITQSELDRLITGDTVSLKKAYLAGERRKFEQDYADQNTYRLYNEKNVKLIRHRSRT*