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berkeley_reactor_200306_planktonic_scaffold_26155_160

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 185655..187130

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EA07_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 497.0
  • Bit_score: 547
  • Evalue 1.40e-152
Transcriptional regulator, GntR family protein {ECO:0000313|EMBL:EDM37988.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 497.0
  • Bit_score: 547
  • Evalue 1.90e-152
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 484.0
  • Bit_score: 418
  • Evalue 2.10e-114

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1476
ATGAAAGTTCCAACACTACCATTCAGCACGCTTATCCTGATCGATCGACAATCCTCAATCCCTATATACACACAACTTGCGAATAGCCTGATTGATTTAATCAGGAATGGAAAGCTGAAATCTGGTTATCAATTGCCGGCAAGTCGGGACATGGCCTCAACGTTAAAACTAAATCGAACGACAGTTATCGCTGCCTACGAAGAATTACAGGTTCAGGGCTGGGTTGAAACCATAAAACGAAAAGGAAATTTTGTTTCCATGCATTTACCCATTACCAGTCCGAAATCATTTCAAGGCACCACATCGAACGAGTCAACAGTCAAACAAATCGACAAGTTTTACAGGACCATCGCTGCTCCACAATCCGGAATAAGGAAACTAAAATCTCAGCAACTAATGATCAATGATGGTTACCCCGATGCCAGAATAGCCCCGCTAGATCTGATAATAGACCGGTACCGTTTTTTATCAAAACGAATGAACGCCTACAACAAATTGCTATCTGAAGGCGCACTTGGAAGTAGTTCTCTTAGAACCGAACTTGCCTCATTTTTGTCCAAAACAAGGGCGTTGAATATAAAAGCAGAACAGGTTCTTGTGACACATGGTGCACAATTAGCAATCTCGATAGCAGCGAGTATAATACTCCGGCCAGGCAGCACAGTTATTGTTGGTGAGCTAAATTATGTTTTAGCGGACAGGCTTTTTGAGCAATTGGGTGCGAAGCTAATTAAGGTCAGGGTTGATCAGGACGGGATCGACGTAGAAGCAATAGAGAACATCTGTAAGCAATCGAGGCCTAGCCTCCTATATATTATTCCCCACCACCATCACCCAACCACGGTAACCCTGAGCGCGGAAAGACGGATTAAGCTTTTAGATATCATTCGACGCTACCAGGTTCCTGTAATCGAAGATGATTATGATTATGATTTTCATTACGAAAATGCACCGATATTGCCATTGGCCAGTGCAGAACACGATGGTTATGTCCTCTACATAGGATCTATTTCCAAAACACTTTCTCCAACAATCAGGCTGGGGTATATCGTTGGAGGAGAAGATTTTGTATGGCAGGCCTCCAAGTTTAAACAAGTATTAGATATCCGTGGCGATGTCTTACTCGAAGAATCTGTTGCTCATATTTTCGCAACCGGCGAAATGCAGAGACATCTCAGGAGATCGGTGAATATATATAGAAAGCGACGGGATCAGTTCTGCGACCTTCTTGAGTCTTCAGTGGGAAATATCGCCAACTTTAGCCTACCTAATGGTGGCATGGCTGTTTGGAGCATATTTGACTCCGAATATTCAATACCCAGGCTCGCAGAGAGGTTGGCTACAAAAGGTATTTTTCTGAATGAAGGAAGCCTTCACAGGTACAAAGATAATGTCAACGGGATCAGATTGGGCTTTGCCTCATTAAATGCGAATGAAATGGAGACATTTGCTAAAGCCTTAAGTGAATCCCGTTGA
PROTEIN sequence
Length: 492
MKVPTLPFSTLILIDRQSSIPIYTQLANSLIDLIRNGKLKSGYQLPASRDMASTLKLNRTTVIAAYEELQVQGWVETIKRKGNFVSMHLPITSPKSFQGTTSNESTVKQIDKFYRTIAAPQSGIRKLKSQQLMINDGYPDARIAPLDLIIDRYRFLSKRMNAYNKLLSEGALGSSSLRTELASFLSKTRALNIKAEQVLVTHGAQLAISIAASIILRPGSTVIVGELNYVLADRLFEQLGAKLIKVRVDQDGIDVEAIENICKQSRPSLLYIIPHHHHPTTVTLSAERRIKLLDIIRRYQVPVIEDDYDYDFHYENAPILPLASAEHDGYVLYIGSISKTLSPTIRLGYIVGGEDFVWQASKFKQVLDIRGDVLLEESVAHIFATGEMQRHLRRSVNIYRKRRDQFCDLLESSVGNIANFSLPNGGMAVWSIFDSEYSIPRLAERLATKGIFLNEGSLHRYKDNVNGIRLGFASLNANEMETFAKALSESR*