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berkeley_reactor_200306_planktonic_scaffold_26155_178

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(205047..208397)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Pedobacter agri RepID=UPI00029B278F similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 995.0
  • Bit_score: 912
  • Evalue 3.70e-262
Uncharacterized protein {ECO:0000313|EMBL:KEQ28232.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 1001.0
  • Bit_score: 884
  • Evalue 1.50e-253
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 1127.0
  • Bit_score: 839
  • Evalue 6.60e-241

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3351
ATGCAAAGATTAAGAAAAACAGCCATCCGACGATGGCGGTATTACCTTTTTTATGCCTTTTGCCTGGTTGCTGCGCTGCTTCCTAGCTCCGCCCGGGCGCAAGTAGGAAGCAAAGCAATAACGTTTGAGGCCAGCGAGGAGAGCCTTACCAGCGCTATTAACCGGCTCTCAAAAGCAAGCGGCATTAACATCGGGTATCCCGGAAATGTTAAGCAGTACCGAAAAATTACGTTGTCTAAAGCCAGCCGTACCGTGCTGGAAACCTTAAAGGCCCTGCTGAAAGACACAGAGCTGGATTGTAAGCCGGTTGGGGAAATGCTAGTAGTGTTTCGTAAACCACAAACGCCAGTTGCACCGTCCAAAAAACTGATAAACGTAAACGGCAAAGTAGTTGACGAAACAGGGCAACCGCTGGCCGCTATTACAATAATGCTACAAGGTACCGACCGCGGCACCACAACTAATAGCAGCGGCTCCTTTGAGCTGGCGCAGGTGCCGGAGGATGCATTTATTATTGCTCAAGGCGTTGGTTTTCCCGCGCAAGCCTTCAACGCTACTGCCCTAATGGAGCTGCGCCTTAGTCGTTCGGTTTCTGATCTGGATGAGGTACAGGTGATCGCATATGGTACGGCTACAAAGCGCTTAAATACTGGTAACGTTGCTACTATAACTACCGCGGATATAGAAAAGCAACCTGTTACCAATGCTCTCGCAGCTTTGCAGGGAAGAGTACCGGGGTTGCTCATTACACAAACCAGTGGTGTTCCTGGATCAGCTTTCAGGGTACAGCTTCGTGGTCAGAGCTTTCTTGATGCTGCGTTTTCCCAAAACGATCCATTAGTTATAATAGACGGCGTCCCCTTTGAAGCGGGCAACCAAAAACGAAACCAAGTCACCAGCGCTGCCAATAATCCGCACTCAGTTAATGAAGGTGGATTAAGTCCACTAAACCTGATCCCTCCATCAGAGATAGAAAGCATTAGTATTTTGAAAGATGCCGATGCAACCTCTATTTATGGTAGTCGTGGCGCAAACGGTGTAATCTTAATTACTACGAAGAAAGGAAAATCAGGAACAACAAAATTTGCCCTAAATACAAACGCCGGATGGAGCCGTGTAGGTAGAACTGTAAATTTCCTAAACCGGCAAGAATACTTTGAAATGAGAAGGGAGGCTTTTAGTAACGACAGCATTACACTAAGTGCTGTTCCTGGCGATCCTGGTTTTGCTCCTGACCTGATGTTGTGGGACACTTCACGCTACACGAATTTTACAGATTTGCTCGTCGGCAATACGGCAAATAAATATGACGTAAACCTTTCCGTGTCGGGAGGCTCGGCCTATACCCAATTCCTGATCGGCGGGAGCTATCATCGTGAAAGTACCGTTTACGGTCGTGATTTCTCAAATAGGATACTCGGACTGCAAGCGACCCTGTCACACAAATCAAAAGATGAAAGGTTTTCTATCTCCCTGACAAGTCTCTATTCCAATGATAATACGCAACTCCCAACTTACGACTTATCGCAGTTTGTGCGAACGGTTCCGAATCTTCGACTTTACGACAGTGCCGGTAATATAAACTGGCAGGACGGTGGTGTAGAATTTATAGACTTCGAGGGTTCTAAGGTCAACCCATTATATTCTTTCAATCAACTGTACAAATCTCAAACTGACAATTTAAATACTAATGTTTTGGTTGGCTATCAAGTATTGCCGTTTCTGAGAGCGAGGACCAGTGTAGGTTATAATATGATGCTCACTGATGAGAAAGGGCTAAACCCGTCAACATCCCTAAGCCCGATCTCTGTAGCACAGGGTGCCACGCCAAATGCATTTATTGGCAACTCGACTATCAGAAGCTGGATAGCTGAACCTCAATTGGACTACTCACAGAAAATTGGATCATCTAAAGTTGGCTTTCTTCTTGGAGGTACTTTCCAGAGCAAGGTTTTCACAAGTAGCTCTATTACGGCACGCAATTATAACTCGGACCTATTACTTGGATCGCTTGCAGCGGCAGGCGCTGTTACCGCATCCAACAACGATTCCAGGTATAGGTACAGTGCATTTTTCGTGCGCGGCAACTATAACTACGCCGATAAATATATTATTAACCTGACAGCCCGGCGGGATGGTTCCAGCAGATTTGCACCCGAAAACCGGTGGTCCAACTTTGGATCAATCGCTGGTGCGTGGATTTTTACTAACGAAAATTTCCTTAAAACATCGTCTATGGCAATGATGTCATTTGGAAAATTCAGAGCCAGCTACGGAAGCTCGGGTAACGACCAAATTGGTGACTACAAATATTTAAGTCTATGGACGAATACATCATTTTCATACAACGGTGTGCCAGGCTTATATCCATCGCGTTTATATAATGCCGATTATCGTTGGGAACTGATAAAGAAACTTGAACTGGCATTGGATTTAGGTTTTTTGGATGATCGCTTACTTATGTCAACTGCCTACTATCGCAACAGAAGCAGCAACCAGTTGGTAACCTACAGCCTTCCTTTCCAAACCGGGTTCGCTAACGTGATACAGAATTTCCCTGGCCTCGTACAGAACAATGGATGGGAGTTTATGCTTACGTCGCAAAACATACAAAGCGAGCGCTTTCAGTGGCAAACATTATTCAATATAACCCTTCCCAAAAACAAACTGGTCAGCTTTCCCGATTTAGACAGTTCACCTTACGCCAATCTGTACAAGGTGGGGCGTTCGCTCACCATAGTAAGGGGCTATAGATACACCGGAATGAATCAGGCTACCGGTATGTACACGTTTGAGGATTTAGATGGCAACGGGCTGCTCAACTCAGCAGATCATCAATGGTTTGACGACAGGGACCCGGATTTCTATGGAGGGCTGCAAAACAACCTTACATATAAGAGCTGGAGCTTCAATTTTCTATTAGACTTCCGAAAACAGAAGGGTACCAATTACCTCGCGCAACTAAACACTTATGCACCAGGGCAAATGTCGAACCAGCCTGACCTGGTGTTGGATCGATGGCAATACCCTGGGGACCATGCACCTCTTCAAAGATTTACCACAGGGCAAAACAGTATCTCTTATCCATACCTAGCCTCAGCAGCAAATTTTACATTTTCGGATGCAAGAAATACGGATGCCTCTTTTGTAAAGCTGAGAAATGTAGCTCTTTATTATAGCTTGCCCGAAAGCCTGTTAGGTAAAACCAAAATCAAATCTTTAAGAGTATACGCGCAGGGACAAAATCTTCTTACAATTACCAAATACAAAGGTGCAGATCCTGAAGTACAAAATGTATTTCAGTTGTCACCGTTGACGACAATTGTCCTGGGCTTACAAACATCATTCTAA
PROTEIN sequence
Length: 1117
MQRLRKTAIRRWRYYLFYAFCLVAALLPSSARAQVGSKAITFEASEESLTSAINRLSKASGINIGYPGNVKQYRKITLSKASRTVLETLKALLKDTELDCKPVGEMLVVFRKPQTPVAPSKKLINVNGKVVDETGQPLAAITIMLQGTDRGTTTNSSGSFELAQVPEDAFIIAQGVGFPAQAFNATALMELRLSRSVSDLDEVQVIAYGTATKRLNTGNVATITTADIEKQPVTNALAALQGRVPGLLITQTSGVPGSAFRVQLRGQSFLDAAFSQNDPLVIIDGVPFEAGNQKRNQVTSAANNPHSVNEGGLSPLNLIPPSEIESISILKDADATSIYGSRGANGVILITTKKGKSGTTKFALNTNAGWSRVGRTVNFLNRQEYFEMRREAFSNDSITLSAVPGDPGFAPDLMLWDTSRYTNFTDLLVGNTANKYDVNLSVSGGSAYTQFLIGGSYHRESTVYGRDFSNRILGLQATLSHKSKDERFSISLTSLYSNDNTQLPTYDLSQFVRTVPNLRLYDSAGNINWQDGGVEFIDFEGSKVNPLYSFNQLYKSQTDNLNTNVLVGYQVLPFLRARTSVGYNMMLTDEKGLNPSTSLSPISVAQGATPNAFIGNSTIRSWIAEPQLDYSQKIGSSKVGFLLGGTFQSKVFTSSSITARNYNSDLLLGSLAAAGAVTASNNDSRYRYSAFFVRGNYNYADKYIINLTARRDGSSRFAPENRWSNFGSIAGAWIFTNENFLKTSSMAMMSFGKFRASYGSSGNDQIGDYKYLSLWTNTSFSYNGVPGLYPSRLYNADYRWELIKKLELALDLGFLDDRLLMSTAYYRNRSSNQLVTYSLPFQTGFANVIQNFPGLVQNNGWEFMLTSQNIQSERFQWQTLFNITLPKNKLVSFPDLDSSPYANLYKVGRSLTIVRGYRYTGMNQATGMYTFEDLDGNGLLNSADHQWFDDRDPDFYGGLQNNLTYKSWSFNFLLDFRKQKGTNYLAQLNTYAPGQMSNQPDLVLDRWQYPGDHAPLQRFTTGQNSISYPYLASAANFTFSDARNTDASFVKLRNVALYYSLPESLLGKTKIKSLRVYAQGQNLLTITKYKGADPEVQNVFQLSPLTTIVLGLQTSF*