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berkeley_reactor_200306_planktonic_scaffold_26155_114

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(137365..137724)

Top 3 Functional Annotations

Value Algorithm Source
HxlR family transcriptional regulator n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CNE0_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 103.0
  • Bit_score: 164
  • Evalue 6.00e-38
yybR_7; putative HTH-type transcriptional regulator YybR similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 108.0
  • Bit_score: 168
  • Evalue 9.10e-40
Putative HTH-type transcriptional regulator YybR {ECO:0000313|EMBL:AJW63499.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 108.0
  • Bit_score: 168
  • Evalue 4.50e-39

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Taxonomy

Elizabethkingia sp. BM10 → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCTATAAAAACAAGCACCGCAGCTGCATGCCCCGTAGACTATGCCTTTAAACGGATCGGAGGAAAATACAAGGGCCGTATTATATGGCACCTGCACCTGGACGGCGTGCTCCGCTACGGAGCGCTCCGGAAACAGATGACCGATATAACGCCGAAGATGCTGACCCAAACGCTACGCGAACTGGAAGAGGATGGCCTGGTATCCCGCAAGGTCTACCTCGAAGTGCCGCCCAGGGTGGAGTACACCTTGACGCCGGTAGCGGCAGAACTGATCCCTTTTATACAACACCTGAAACAATGGGGTAAACGGCAGATGGACCGGGAACAGGCCAAAACCGGCAAAGCGGTTTGCCGCTGA
PROTEIN sequence
Length: 120
MPIKTSTAAACPVDYAFKRIGGKYKGRIIWHLHLDGVLRYGALRKQMTDITPKMLTQTLRELEEDGLVSRKVYLEVPPRVEYTLTPVAAELIPFIQHLKQWGKRQMDREQAKTGKAVCR*