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berkeley_reactor_200306_planktonic_scaffold_26155_180

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 209562..210134

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K2K2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 178.0
  • Bit_score: 147
  • Evalue 7.20e-33
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL74385.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 178.0
  • Bit_score: 147
  • Evalue 1.00e-32
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 193.0
  • Bit_score: 115
  • Evalue 1.50e-23

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGCCAATGCTTATGACATAGACGATGTAGAGCTACAAGCGTTATGGAAAAATGGCGATGACCTCGCCTTCGCTGAGTTTCATGGCCGGCATTTTTTGTCCCTGGTTAACATAGCGGCCCGAAAGCTAGATAGAATTGAAACTGCGGAAGAGACGGTGCAGGATGTTCTGCTGGCCCTTTACGAAAGCCGGTCAGTAGAAGGCAATCCTTTGGCTTACTGCTATGGCATTTTAGAGCATAAGATTATCGATTATTATCGCCGCAACAAATTGTTGTTAGTTGCCGAGGCAGATGAAGAGCCCGCCGCGGGAGATGTTGGCGGAGCAGGCCATCCAATGGAGTACCGGGAACTTCAGGCGCAGATCACTGCTTATATCCAGCAGCTTCCTGAGCAGGCACGTGCAGTATTTGTTTTACGAAGAGAAGGAAATTTAAGTAACCGGGAAGTGGCTCAAAAACTGGGCCTGTCTGAGCGAACGGTAGAGGCGCATATGCGAAACGCGCTTTCTATTCTAAAAAAGCAATTGGGCAATGTGGCGCTGGTAAGTATTTTCGTTTTGGCAGCATCGTAA
PROTEIN sequence
Length: 191
MANAYDIDDVELQALWKNGDDLAFAEFHGRHFLSLVNIAARKLDRIETAEETVQDVLLALYESRSVEGNPLAYCYGILEHKIIDYYRRNKLLLVAEADEEPAAGDVGGAGHPMEYRELQAQITAYIQQLPEQARAVFVLRREGNLSNREVAQKLGLSERTVEAHMRNALSILKKQLGNVALVSIFVLAAS*