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berkeley_reactor_200306_planktonic_scaffold_26454_130

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(138109..141738)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 1224.0
  • Bit_score: 1625
  • Evalue 0.0
DNA polymerase III, alpha subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NJS7_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 1238.0
  • Bit_score: 1602
  • Evalue 0.0
DNA polymerase III subunit alpha similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 1238.0
  • Bit_score: 1602
  • Evalue 0.0

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3630
ATGCAATTCTCCCACTTACATAATCATACCCAGTTTTCGCTCCTCGACGGGGCCTCTTCCATTTCCCGTTTATACAAAAAAGCAGAAAAAGATAATATGCCTGCGGTAGCCATTACCGATCACGGCAATATGTTTGGCGCTTTCGAATTTGTGGCCCAGGCCTGGAAAAATACCAAGGTGGTAGGCACCACGGCAGAGGGCAAAGAAATTAAAGAGCCGGTGGTAAAACCCGTAGTGGGCTGTGAGGTGTACCTGGTAGAAAACCGGCATAAACGCCAGTTCTCGCGCGATGAGGGTAAGGACAAACGGTACCACCAATTGTTCCTGGCTAAGGACGAAACGGGTTATAAAAACCTGGTAAAGCTTTGCTCGCTGGGCTTTATGGAAGGCCTGTACGGTAAATATCCCCGTATCGATAAAGAGCTCGTATTGCAATACCACGAAGGTCTTATCGCTACTACCTGTTGTATCGGCGCTTCGGTGCCCCAGGCCATCCTCCGTAAATCGGAAGAAGAGGCCGAGAAGGAATTCAAGTGGTGGCTCGACCTGTTTGGCGACGATTATTATGTAGAGCTGCAGCGCCACGAAATTCCCGAACAGATAAAGGTGAACGAGGTGCTGCTGAAGTTTGCCAAAAAGTATAATGTACCCATCATCGCCTCCAACGACTCGCACTATGTAGAGCAGGAAGATGCCAATGCACACGACATCCTGTTGTGTATCAATACCGGCGAAAAACAAAGCACGCCCACCAATAAGGAGTTTGCGGACGACGATGAGAACAGGCCTAAAAACTCCCGCTTCGCGTTTTATAACGACCAGTTCTATTTTAAGAAAACGGAAGAGATGGCCACGCTCTTCCACGATATACCCCAGGCGATCGACAATACCCAGATGATTGTCGATAAGATCAAACCGCTGAAGCTGGAACGCGAGATCCTGCTGCCCCACTTTAAGGTGCCTGCAGAATTCAGCGATAACCAGGATGCTTACCTTGAGCACCTTACCTGGACCGGCGCAAGGGAGCGTTATAAGGAAATAACGCCCGATATCGAGGAGCGCCTCAACTTCGAGTTGTTTACCATCCGGACCATGGGTTTTGCGGGTTACTTCCTCATCGTATCCGACTTTATCCAGGCCGGCCGCGACCTGGGCGTGTTTATCGGGCCGGGCCGTGGTTCGGCCGCCGGTAGCGCCGTGGCCTATTGTATCGGTATTACCAATATCGACCCGATCAAGTATAACCTCCTGTTCGAACGTTTTCTGAACCCCGACCGTAAGTCGATGCCCGATATCGATACGGACTTCGATGATGTGGGCCGGCAAAAGGTGATCGACTATGTAGTAGATAAATACGGGAAAAACCAGGTGGCGCACATCGTTACCTATGGTACCATGGCGGCCAAAATGAGTATCAAGGACGTAGCGCGTGTACTCGACCTGCCGTTACCCGATGCCAATGCCCTGGCCAAACTGGTGCCCGATAAACCCGGTATATCGCTGAAACGCCTGCTGCGCGCCCCGATCGACTCCTCTACCGCTGATGAGAAAAGCCTGAAAGAGAAAGAGGGCCTGCAGGAAGAAGACCTGATCGGCGTACGCCGCCTGCGCGAAATACTGGTAGAGCAGGGTACGGTGCAGGGCGAAGTAATGCGCGAGGCCGAAAAGCTCGAGGGCTCGGTGCGGAATACCGGTATCCACGCAGCGGGTATCATCATTGCCCCTACCGACCTGTCGGAGCTGCTGCCCGTAAGTGCGGTGAAGGATGTAAACCTCCTGATTACCCAGTTCGAGGGTAAGGTGATCGAAGATGCCGGTGTAATCAAGATGGACTTCCTGGGTCTGAAGACCCTGACCATTATTAAAGATGCGCTCGACCTTATCAAACGTAATTACAGTATCGATATTGATATCGATTATATACCGCTCGACGACGAAGAGACCTATAAGCTTTACCAGCGCGGCGATACCAATGCCACGTTCCAGTTCGAGAGCCCGGGTATGCAGAAGCACTTACGCGATCTGAAGCCCGATAAGTTTGCGGATCTGATCGCGATGAACGCCTTGTACCGGCCGGGCCCGATCCAGTACATCCCTAACTTTATTAAACGTAAACACGGCGAAGAGGCCATTACCTACGATCTTCCGGAAATGGAGGAGTACCTGGCCGATACCTACGGTATTACCGTATACCAGGAACAGGTGATGTTGCTGTCGCAATCGTTGGGCGGTTTTAGTAAGGGTGATGCCGACGTACTGCGTAAGGCGATGGGTAAAAAGCAAAAGTCTGTACTGGACAAGATGAAAGTACAGTTTATCAAAGGGGCAACCGAAAAAGGGCACCCGGCCGATAAGCTGGAAAAAGTATGGACCGACTGGGAAGCCTTTGCCCAATACGCCTTCAACAAGTCGCACTCCACCTGTTATGCCTTCGTGGCTTACCAGACGGCATACCTGAAAGCGCATTATCCCTCCGAGTTTATGGCGGCGGTAATGAATAACGCCAACAGTATTGAGAAGATCACCTTCTTTATGGAAGAGTGTCAGCGTATGAACATTAAAGTACTCGGTCCCGATATCAACGAATCGCTGAAAGGTTTCTCGGTAAACAAAGAAGGCGTGGTCCGCTTCGGGCTTGGCGCTATTAAAGGCGTAGGCGAGGCGGCGGTAGAAGATATTCTTGCAGAGCGGGAAAAGAACGGCGTGTTTAAAACCGTATTCGACCTCATTACCCGGGTTAACCAGCGTACGGTAAATAAAAAATCATTGGAAAGCCTGGTACTGGGCGGTGCATTCGATTGTTATCCCGAAATACACCGGGCCCAGTATTTCTATGCGCCGCCAACCGACCCGGTTACCGGTCTCGAGCGGATTACCCGCTTCGGCAGCCAGTACAATGCGGCGCTCAACAATACCGTCAACAGCTTGTTTGGCGATGCCGAAATGCCGGAGATCAAACCGCCGGATATGCCGAAGTGCGAACCCTGGACGCTGCACGACCTGCTGGAAAAAGAAAAAGAAACCATTGGTATCTACCTCAGCGGCCACCCGCTCGACGGGTTTAAGTTCGAGATGAATAATTATAACATTATCCCCATCTCGGAGCTCGATAGCTTTAAGGGGCGCCAGCTCCGGATCGCAGGTTATGTATCTGATCCGCGCCATGCCCTTACCAAAAAAGGCGACAAGTTTGGTAAGATGACCGTCAACGACTATTCCGGGAGTATCGAACTGATGTTCTGGAAAGAGAACTATGTGCATTTCGGGGATTATATACAGGAGTCGCAAAAGCTGATGCTGACCGGTATCTACGAAGAAAACCGGTTCCGCCCGGGACAGATGGAGTTTAAAGTACAAAGCGTGATGTTGCTGGGCGATGTCAAAACCAAGCTGACTAAAAAACTATCGCTCGCCTTCCCGCTCGAAAAGCTCGACTACGATTTTGTCAACTTCCTGCAGCGCAATGTGCAGCAAAACCCAGGCGGCTGTGAGCTTAACTTCCAGATCTTCGACGGAGAAAGCGAACGCTCCATGCAACTGCGTTCCAATAACGGCAGGCTGCTGGTAAACGACGATCTTATCGAATATTTGCAGACCGCCGATATCAAGTACAAAGTAGAAGTAAGCTAA
PROTEIN sequence
Length: 1210
MQFSHLHNHTQFSLLDGASSISRLYKKAEKDNMPAVAITDHGNMFGAFEFVAQAWKNTKVVGTTAEGKEIKEPVVKPVVGCEVYLVENRHKRQFSRDEGKDKRYHQLFLAKDETGYKNLVKLCSLGFMEGLYGKYPRIDKELVLQYHEGLIATTCCIGASVPQAILRKSEEEAEKEFKWWLDLFGDDYYVELQRHEIPEQIKVNEVLLKFAKKYNVPIIASNDSHYVEQEDANAHDILLCINTGEKQSTPTNKEFADDDENRPKNSRFAFYNDQFYFKKTEEMATLFHDIPQAIDNTQMIVDKIKPLKLEREILLPHFKVPAEFSDNQDAYLEHLTWTGARERYKEITPDIEERLNFELFTIRTMGFAGYFLIVSDFIQAGRDLGVFIGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDIDTDFDDVGRQKVIDYVVDKYGKNQVAHIVTYGTMAAKMSIKDVARVLDLPLPDANALAKLVPDKPGISLKRLLRAPIDSSTADEKSLKEKEGLQEEDLIGVRRLREILVEQGTVQGEVMREAEKLEGSVRNTGIHAAGIIIAPTDLSELLPVSAVKDVNLLITQFEGKVIEDAGVIKMDFLGLKTLTIIKDALDLIKRNYSIDIDIDYIPLDDEETYKLYQRGDTNATFQFESPGMQKHLRDLKPDKFADLIAMNALYRPGPIQYIPNFIKRKHGEEAITYDLPEMEEYLADTYGITVYQEQVMLLSQSLGGFSKGDADVLRKAMGKKQKSVLDKMKVQFIKGATEKGHPADKLEKVWTDWEAFAQYAFNKSHSTCYAFVAYQTAYLKAHYPSEFMAAVMNNANSIEKITFFMEECQRMNIKVLGPDINESLKGFSVNKEGVVRFGLGAIKGVGEAAVEDILAEREKNGVFKTVFDLITRVNQRTVNKKSLESLVLGGAFDCYPEIHRAQYFYAPPTDPVTGLERITRFGSQYNAALNNTVNSLFGDAEMPEIKPPDMPKCEPWTLHDLLEKEKETIGIYLSGHPLDGFKFEMNNYNIIPISELDSFKGRQLRIAGYVSDPRHALTKKGDKFGKMTVNDYSGSIELMFWKENYVHFGDYIQESQKLMLTGIYEENRFRPGQMEFKVQSVMLLGDVKTKLTKKLSLAFPLEKLDYDFVNFLQRNVQQNPGGCELNFQIFDGESERSMQLRSNNGRLLVNDDLIEYLQTADIKYKVEVS*