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berkeley_reactor_200306_planktonic_scaffold_26454_138

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(148474..149310)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor Ts n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK40_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 278.0
  • Bit_score: 349
  • Evalue 2.40e-93
translation elongation factor Ts similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 278.0
  • Bit_score: 349
  • Evalue 6.70e-94
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 278.0
  • Bit_score: 349
  • Evalue 3.30e-93

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 837
ATGAGCGTTACTATCTCTGCTGCAGATGTAAACAAATTGCGCCAAATTACAGGCGCTGGTATGATGGATTGCCGTAAGGCTTTGGCTGAAAGCGATGGTGATTTTGAAAAGGCAATTGACTACCTGCGTCTGAAAGGCCAGAAAGTTGCTGCTAACCGTAGCGACCGTGATGCAAAAGAAGGTGTAGCTGTTGCAAAAGCAACGCCCGACGCGAAATACGGCATCATCATTCAGCTTTCTGCAGAAACAGATTTCGTATCTAAAAACCAGGAGTTCGTAGACTTCGCTAACGATATCGCCGAAGCTGCCCTGCACAATATGCCTAACGACATCGAGGCCCTGAAAGCCCTGCCACTGGGTGGTGCTACCATCAACGACAAACTGCTGGAAATGGTTGCCAAAATCGGTGAGAAAATCGATATCGTACGTTACGAGCAGGTAAATGCTGACGCAGTAGTTCCTTATATCCACGGTAACTACCGTATCGGTGTACTGGTAGGTCTGAACAAACCTGAAAGTGAAGCCATCGTTGCCGCCGGCCGCGACGTAGCGATGCAGATCGCTGCTATGAACCCACTGGGTGTTGATGCAGACAGCATCGCTCCTGAAGTGATCGAGCGCGAAAAAGCAATTGCTATCGAGCAGATCGTTGCTGAAGGTAAACCTGCCGATATGGCTGAAAAAATTGCCGCTGGTAAACTGAACAAATTCTTTAAAGACAATACCCTGCTGGCACAGCCATTCGTAAAAGACAACGGTGTATCTGTTGCCGATTACCTGAAAGGTGTTGAAAGCGGCCTGACTGTTACCACGTTCCGTCGTGCTGCAATCGGCTAA
PROTEIN sequence
Length: 279
MSVTISAADVNKLRQITGAGMMDCRKALAESDGDFEKAIDYLRLKGQKVAANRSDRDAKEGVAVAKATPDAKYGIIIQLSAETDFVSKNQEFVDFANDIAEAALHNMPNDIEALKALPLGGATINDKLLEMVAKIGEKIDIVRYEQVNADAVVPYIHGNYRIGVLVGLNKPESEAIVAAGRDVAMQIAAMNPLGVDADSIAPEVIEREKAIAIEQIVAEGKPADMAEKIAAGKLNKFFKDNTLLAQPFVKDNGVSVADYLKGVESGLTVTTFRRAAIG*