ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_26454_155

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 168140..169468

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLC4_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 433.0
  • Bit_score: 607
  • Evalue 7.70e-171
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 433.0
  • Bit_score: 607
  • Evalue 2.20e-171
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACU58468.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 433.0
  • Bit_score: 607
  • Evalue 1.10e-170

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1329
ATGCAAGCAAAAAACTATACGGTAGAACAGATACTGGCCAACCTGAACATCGAAGCCTTAAACGAGATGCAGCTGGCCGCTGTTGCTGCTAACGAACAGCATAATGACGTAATGCTCCTGTCGGCCACCGGCTCGGGTAAGACCCTAGCCTTCCTGCTGCCACTGCTGAGCCGGCTCGACCCCGAAAGCCGCGACAGCCAGGCATTGATTATTGTGCCTTCGCGCGAGCTGGCCATGCAGATCGAAAAAGTGTTCAAACAAATGGGTACCGGTTTTAAGATTACCTGTTGTTACGGCGGCCATAAACGGGAAATTGAAGAAAATAACCTGATCCAGCCCCCGGCCGTAATTGTAGGCACCCCGGGCAGACTGGCCGACCATATCCGCAGGGAAAATATTAAAACCGCACATATCCGCACCCTGGTGCTGGACGAGTTCGACAAATCGCTCGAGCTCGGGTTTACCGGCGAGGTTTCTGAAATTATCGAAGCCCTGCCTGCACTGGAAAAACGTATCCTCACCTCGGCTACTGAAGCTGTGGAAGTTCCCGAATTCGTAGGCCTGCAGCAGGTTGCCGAACTTAACTTCCTGGATGAGGCCGGCGAAACGGACAATGGCCTTGCGATTAAAAAAGTATTATCCGGTAGTAAAGATAAACTCGATACCTTATTCGAACTGATCTGTTACCTCGGCAACCGCTCTACTATCGTTTTCTGTAATCACCGGGAATCTGTGGAGCGTACCCACCAGTTATTACGGGCAAAGGGTATCCTCTCCGAATTTTACCACGGCGCCATGGAACAACGGGATCGCGACAGCGCACTGTGTAAGTTCCGCAATGGCACCAGCAACCTGCTCGTCACCACCGACCTGGCCGCACGCGGGCTCGACATTCCCAATATCCGTTATATCATACACTACCACTTACCGCTGGGCGAAGATGTGTATACCCATCGTAACGGGCGTACCGCCCGTATGGATGCCAGTGGTACCGCAATCCTTATCCTCTCGGCCGAAGAGCACTTGCCGGCCTATATAACCGAACCGGTAGAGGAGATCAAACTCGAAGGACCTTACGAGATCCCCGAAAAGCCCAAATGGACGACGCTGTACCTGCCCCTGGGCAAAAAGAACAAGGTCAATAAAATCGACATTGTCGGCTTCCTCTCTAACAAAGGAGCCTTGAAACCGGAAGATATCGGCCTGATCGAAGTCAAAGACTTTTTCTCCTTCGTGGCGGTACGTAAAACGAAGGTCAGTCATATGCTGCAGTTGGTTAAAGAAGAAAGGATCAAAGGCAAGAAAGCGAAACTGGAAGTGGCCAAATAA
PROTEIN sequence
Length: 443
MQAKNYTVEQILANLNIEALNEMQLAAVAANEQHNDVMLLSATGSGKTLAFLLPLLSRLDPESRDSQALIIVPSRELAMQIEKVFKQMGTGFKITCCYGGHKREIEENNLIQPPAVIVGTPGRLADHIRRENIKTAHIRTLVLDEFDKSLELGFTGEVSEIIEALPALEKRILTSATEAVEVPEFVGLQQVAELNFLDEAGETDNGLAIKKVLSGSKDKLDTLFELICYLGNRSTIVFCNHRESVERTHQLLRAKGILSEFYHGAMEQRDRDSALCKFRNGTSNLLVTTDLAARGLDIPNIRYIIHYHLPLGEDVYTHRNGRTARMDASGTAILILSAEEHLPAYITEPVEEIKLEGPYEIPEKPKWTTLYLPLGKKNKVNKIDIVGFLSNKGALKPEDIGLIEVKDFFSFVAVRKTKVSHMLQLVKEERIKGKKAKLEVAK*