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berkeley_reactor_200306_planktonic_scaffold_26454_162

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(177095..178348)

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EP18_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 419.0
  • Bit_score: 509
  • Evalue 2.70e-141
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 419.0
  • Bit_score: 509
  • Evalue 7.60e-142
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AEI51344.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 419.0
  • Bit_score: 509
  • Evalue 3.80e-141

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1254
TTGACTTTCGAAGATTTTAAACTGGATTACGATGTGCTCGATGGCATTGAAGCCATGGGCTATCGTAATCCTACTCCTATACAACAACAGGCCATCCCGATCATTATGGAGGGTAAGGACCTGATCGCCTGCGCCCAGACGGGTACAGGTAAGACCGCAGCTTTTGTGCTGCCGCTGCTCGATAAGATCGTAAACATGCCCGCAGAAGGCATCAATACGCTGATCCTCGTGCCCACGCGCGAACTGGCCATACAGATCGATCAGCAGATCGAAGCCATGAGCTATTATATCGACGTGAAGTCGATCGCGGTTTACGGCGGCGGAAGCGGTATCAGCTGGACCCAGCAAAAACAAGCCCTTTCGACCGGAACGGATATTATCATAGCCACCCCCGGCCGCCTGATTGCCCAGATGCAAATGGGCGGGCTCGACTTTTCGAAACTGAAACACCTCGTGCTCGACGAGGCGGACCGTATGCTGGATATGGGTTTTTACGACGACCTGCTGCGTATTGTAAGCGCCCTGCCTGTAAAACGGCAAACGCTTTGCTTCAGCGCTACCATGCCGCCCAAAATACGCGCGCTTACGGCCAAACTGATGGTTAACCCTGAGCAGATTAGCATCGCTATTTCGAAACCGGCAACGGGTATTACCCAACAGGCCTATATGGCGCATGATGAGCAGAAGCACAAACTGGTATTACACCTGCTCAAACCCGGCACCTATAAATCGGTAATCATCTTCTCCTCCAGCAAGGATAAAGTAAAAAAGGTAGAAGCAGAACTGCGCAGGGCCAAGATCAATGCCAAGGCGTTTCACTCCGACCTGAAACAGGAAGAACGCGAAGAACTGCTGCAACAGTTCCGCAACCAGAAAGTAACGGTACTTGTAGGTACGGATGTGCTGTCGCGGGGTATCGATATCGACGGCATCGACCTGGTGATCAATTACGATGTACCACCCGATCCGGAAGATTATGTACACCGCATCGGGCGTACGGCAAGGGCTGAGCGTATGGGAACGGCCATTACGTTTATCAGCGATAAGGACCAGCGCCGTTTTGCCTCGATCGAAAAACTGATCGACCGCAGCATCGACAAACTGCCTTTACCCGAAGGTTATGGCCCGGCCCCGGTTTATGACCCGCAACGGCGCAGCGGCGGCGGCGGTCATGGGCATGGCGATAAGAAGAAAAAATGGAAAGGTAACGGGCAAAAGAAATCGAAGCCCAAGCCGAAACCCAAACCCGAATAG
PROTEIN sequence
Length: 418
LTFEDFKLDYDVLDGIEAMGYRNPTPIQQQAIPIIMEGKDLIACAQTGTGKTAAFVLPLLDKIVNMPAEGINTLILVPTRELAIQIDQQIEAMSYYIDVKSIAVYGGGSGISWTQQKQALSTGTDIIIATPGRLIAQMQMGGLDFSKLKHLVLDEADRMLDMGFYDDLLRIVSALPVKRQTLCFSATMPPKIRALTAKLMVNPEQISIAISKPATGITQQAYMAHDEQKHKLVLHLLKPGTYKSVIIFSSSKDKVKKVEAELRRAKINAKAFHSDLKQEEREELLQQFRNQKVTVLVGTDVLSRGIDIDGIDLVINYDVPPDPEDYVHRIGRTARAERMGTAITFISDKDQRRFASIEKLIDRSIDKLPLPEGYGPAPVYDPQRRSGGGGHGHGDKKKKWKGNGQKKSKPKPKPKPE*