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berkeley_reactor_200306_planktonic_scaffold_26454_188

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(196666..197691)

Top 3 Functional Annotations

Value Algorithm Source
RNA ligase, T4 RnlA n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MQJ2_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 349.0
  • Bit_score: 373
  • Evalue 1.40e-100
Uncharacterized protein {ECO:0000313|EMBL:KIA97604.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 333.0
  • Bit_score: 427
  • Evalue 1.50e-116
RNA ligase similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 318.0
  • Bit_score: 283
  • Evalue 5.50e-74

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Taxonomy

Flavobacterium sp. KMS → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1026
ATGTCAACGATAAATATAAGCCAGCTGCAACAACATATTACCGATGGCCTGGTTGCCGTACAAAAGCATCCGCAGCTGGAACTGTATATCTATAATTATACGGCAAAGGTGCAATATGAACGTACCTGGAACGAGATTACCCTGGCTTGCCGTGGCCTGATCCTGGATGCAGCGTATAACATCGTTGCCCGGCCCTTTCCAAAATTCTTTAACCTGGAAGAGCTGGATGCGGCCGTTATCCCGGACCTGGCCTTCGAGGTGTTCGAAAAAATGGATGGTTCGCTGGGTATCCTGTACTGGGATAACGACCAGCCCTATATCGCTACACGCGGCTCTTTCACCAGTGTACAGGCGCAGAAGGCGAATACGATGCTGTATGGCCGTTATCGGGAGGCTATTGCCGGGCTGGATCGCGATAAGACCTACCTGTTCGAGATTATTTACTCCGAAAACAGGATTGTGCTGGACTACGGCGATGCCGAAGAACTGGTATTGCTGGCGATCGTGGATACACAAACAGGCAAAGAATCTCCGCTGCAGGAACTGGGTTTCCCTTTGGTAAAACGCTACGACGGCATCAAGGACCTGTCGGCAATCCGTGCGCTGAACGATGATACCCGCGAGGGTTTCGTGATCCGTTTTGCCAATAACTTCAGGCTTAAAGTAAAATTTAAAGAATACCTGCGCCTGCACCGCATCATCACGCAAATCTCGTCGCTGGACATCTGGGAATACCTGAGCGCCGGCGCCTCCTTTGACGAGATCCTGGAGCGCGTACCCGACGAGTTTTTCCAATGGGTAAAAGCTGTGCGTAACCAGCTGCTGGAGCAGTACCAGGCGATCGAAACACAATGCCGCGCGGATTTTAAAGTGCTGGAAAGCCGGAAGGATACCGCCTTGTATTTTTTACAATGTGCCCAGCCCGCCGTGTTGTTCGCGATGCTGAACGGTAAAAACTATGCACCCATTATCTGGAAGCAGTTGCGGCCGAAATTCGAAAAACCTTTTATACAAACAGATACCTGA
PROTEIN sequence
Length: 342
MSTINISQLQQHITDGLVAVQKHPQLELYIYNYTAKVQYERTWNEITLACRGLILDAAYNIVARPFPKFFNLEELDAAVIPDLAFEVFEKMDGSLGILYWDNDQPYIATRGSFTSVQAQKANTMLYGRYREAIAGLDRDKTYLFEIIYSENRIVLDYGDAEELVLLAIVDTQTGKESPLQELGFPLVKRYDGIKDLSAIRALNDDTREGFVIRFANNFRLKVKFKEYLRLHRIITQISSLDIWEYLSAGASFDEILERVPDEFFQWVKAVRNQLLEQYQAIETQCRADFKVLESRKDTALYFLQCAQPAVLFAMLNGKNYAPIIWKQLRPKFEKPFIQTDT*