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berkeley_reactor_200306_planktonic_scaffold_26454_215

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(223713..224021)

Top 3 Functional Annotations

Value Algorithm Source
thioredoxin n=1 Tax=Myroides injenensis RepID=UPI000288AA12 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 86.0
  • Bit_score: 92
  • Evalue 1.50e-16
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 81.0
  • Bit_score: 90
  • Evalue 1.30e-15
TrxA; thiol-disulfide isomerase and thioredoxins similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 83.0
  • Bit_score: 85
  • Evalue 6.60e-15

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Taxonomy

Clostridium sp. CAG:470 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 309
ATGAGTTACCTGGAAAGTTACGGCCTGGAAGAAAAACCGGTACTGTTACAGTTTTATGCAGACTGGTGTATGCCCTGCAAGGCATTGGCGCCTATGGTCGATATGATCGAAGACCGCGCCCAGGGCCAGATCAGCGTACATCGCATCAATATAGATACCAACCCAGACATCGTTGCCGAATTCGAGATCAGTTCGGTGCCTACCCTCGTATTGCTTAAAGGCGGCGAAGAGGTATGGGGCTTTACCGGGTTGATGTCGCCGGTAGAGTTGAAACGCGAAATCGAATATGCCGCATCGGTAAAATTATAA
PROTEIN sequence
Length: 103
MSYLESYGLEEKPVLLQFYADWCMPCKALAPMVDMIEDRAQGQISVHRINIDTNPDIVAEFEISSVPTLVLLKGGEEVWGFTGLMSPVELKREIEYAASVKL*