ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_26454_218

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 226319..227068

Top 3 Functional Annotations

Value Algorithm Source
beta-lactamase (EC:3.5.2.6) similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 249.0
  • Bit_score: 256
  • Evalue 4.10e-66
Beta-lactamase n=2 Tax=Flavobacterium johnsoniae RepID=A5FE61_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 249.0
  • Bit_score: 256
  • Evalue 1.40e-65
Uncharacterized protein {ECO:0000313|EMBL:ETZ21715.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 221.0
  • Bit_score: 271
  • Evalue 7.90e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 750
ATGATCAAAAAACTTGCCTTATTGTTCAGTATCTGCGCCACTATGGGTGCTGCTGCAACAGAAAAGAAACCAGGCCTGGAGATCAGGCAGCTTACCGGCGACTTCTACATTTTTACCACTTACCAGGTTTATAACAACGAGCCCGTACCGGCCAATGGTATGTATGTGGTAACGGATAAAGGCGTGGTGATGCTGGACGGCGCCTGGGATCCTGCGCAGAACCAGCCTTTGCTGGATAGTATCCAGGCAAGGCATCATAAAAAAGTAGTACTCGAAATCGGTACGCATTACCATAGCGATCGCAGCGGCGCTTTCGACTTTATGCGCAAGAAAGGTATAAAAACCTATTCTTCGCTGAAAACGCTGGAACTGTGTAAACAATTCGGAGAACATGAAGCTGAGTTCTATTTCGTAAAAGACACGACTTTCCATGTAGGTAAACTGGAGTTTGAAACCTATTACGCCGGCCCGGGGCATACGCGGGATAATATCGTGATCTGGTTTCCGAAGGCTAAGATATTGTATGGCGGATGCCTGATAAAAGACGCAGATGCCAAGGACCTGGGCAATATAAAAGATGCCGACCTCGAACAATGGCCGGAGACCCTGAAGAAAGTACAACAACGTTATCCCGAACCGGCTTACATCATCCCCGGACATGGTAACTGGGATAGCCGCAGGGCATTGATCCACACACTCGAACTGCTGCAGCGCGATAAAAAGAACAGGAAAGGAACCGGAAAAAAATAA
PROTEIN sequence
Length: 250
MIKKLALLFSICATMGAAATEKKPGLEIRQLTGDFYIFTTYQVYNNEPVPANGMYVVTDKGVVMLDGAWDPAQNQPLLDSIQARHHKKVVLEIGTHYHSDRSGAFDFMRKKGIKTYSSLKTLELCKQFGEHEAEFYFVKDTTFHVGKLEFETYYAGPGHTRDNIVIWFPKAKILYGGCLIKDADAKDLGNIKDADLEQWPETLKKVQQRYPEPAYIIPGHGNWDSRRALIHTLELLQRDKKNRKGTGKK*