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berkeley_reactor_200306_planktonic_scaffold_26454_247

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(254193..255062)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 284.0
  • Bit_score: 311
  • Evalue 1.00e-81
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMD2_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 284.0
  • Bit_score: 311
  • Evalue 7.40e-82
dihydrodipicolinate synthase similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 284.0
  • Bit_score: 311
  • Evalue 2.10e-82

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGTTCAATGGTACAGGAGTAGCACTGGTTACTCCATTCAAAAGCGATAACGCCATCGACTACCCCGCTTTGGGAAAAATTATAGACGCTACGATAGATGGTGGCGTCGATTTTCTCGTTGCCCTGGGTACTACTGCCGAAACCCCTACCCTCTCGAAAGAAGAGAAACGGGATGTGCTCGTTTTTATCCTCGACCATACGCGAAAACGGGTACCGGTAGTCGTGGGTATCGGCGACTACAGCACGCAGGCCATGCTGGATACGCTCAATAGCTACCCCATGGACCGTGTTGATGGTATCCTGAGTGTTGCCCCTTATTACAACAAGCCTTCGCAGGAAGGCATATACCGCCACTTTAAGGCATTGGCCGAAGCTACCGACAAGCCCATTATCCTTTATAATGTACCCGGCCGCACGGTTACCAATATCCTGCCCGATACGGTAGTACGCCTGGCGCAGGATTGTAAAAACATAGTAGCGATTAAAGAAGCCAGCGGAAGCATACCGCAATGCATGGAACTGGTACAGAAAGCCCCGGAAAGCTTTACCGTACTGAGCGGCGACGATGCCCTGATCCTGGCTCAAACGGCTATAGGCATGAAGGGTGTAATCTCGGTTGCGGCCAACTGTTATCCTAAAGATTTTTGCACCATGGTAAAACATGCACTGCACAACGAAATGGATGCGGCCCGTAACTTACATTATAAACTGTTACAACCTATCAACCTCCTGTTTGCCGAAGGTAACCCCACCGGTGTAAAATATGTGCTGCACCTGCAGGGGCTCTGCGAAAATGTACTGCGCCTGCCGCTTATTACGGCCAGCACGGAGCTGGAGCAACAGATAAAGGCCGCTGCACCACAGGCATAA
PROTEIN sequence
Length: 290
MFNGTGVALVTPFKSDNAIDYPALGKIIDATIDGGVDFLVALGTTAETPTLSKEEKRDVLVFILDHTRKRVPVVVGIGDYSTQAMLDTLNSYPMDRVDGILSVAPYYNKPSQEGIYRHFKALAEATDKPIILYNVPGRTVTNILPDTVVRLAQDCKNIVAIKEASGSIPQCMELVQKAPESFTVLSGDDALILAQTAIGMKGVISVAANCYPKDFCTMVKHALHNEMDAARNLHYKLLQPINLLFAEGNPTGVKYVLHLQGLCENVLRLPLITASTELEQQIKAAAPQA*