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berkeley_reactor_200306_planktonic_scaffold_26454_248

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(255090..255692)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 190.0
  • Bit_score: 226
  • Evalue 2.30e-56
Peptide deformylase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RQJ3_LEAB4 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 190.0
  • Bit_score: 226
  • Evalue 1.70e-56
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 190.0
  • Bit_score: 226
  • Evalue 4.70e-57

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Taxonomy

Leadbetterella byssophila → Leadbetterella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
TTGACAGAACCCGCCGAACTACCTATTGTTGCTTACGGGCACCCGGTGTTGCGCCAGAAATGTGCGGATATCGATGCTGCGTACCCCGGGCTTTACGAGCTGGTGATCAATATGTGGTATACCATGTACAATGCCGGCGGCTGCGGACTTGCAGCGCCGCAGGTTAATGTACCGGTAAGGATATTCCTGGTCGACAGCCGCAACACCTTCGAGGTGATGGATGACGAAGAGCGGGATAGCCTGTTTGACGGCGACGAAGGCATACGCGATACCTTTATCAATGCCCGCATTATAGAACGGAGCGAACGCACCTGGACCGATGAGGAAGGCTGCCTGAGCATACCCAACCTTTCGGGCGAGGTAGAGCGGCCCTGGAGTATTACCATCAGTTATCTCGACGGGCGCCTGGAAGAACAGGTAAAAACATTCCACGGTATTACGGCAAGAATGATCCAACACGAATACGACCACATAGAAGGCATCCTCTATCTCGACTACCTGAGCAGGCGCAAACAAGCGGCCGTAAAGAAACGGCTGCAGCGGATTGCCGAAGGAAAAGAAAGCGCACGCTACCCGATGTTATATACCGACAATTCCGTTTAA
PROTEIN sequence
Length: 201
LTEPAELPIVAYGHPVLRQKCADIDAAYPGLYELVINMWYTMYNAGGCGLAAPQVNVPVRIFLVDSRNTFEVMDDEERDSLFDGDEGIRDTFINARIIERSERTWTDEEGCLSIPNLSGEVERPWSITISYLDGRLEEQVKTFHGITARMIQHEYDHIEGILYLDYLSRRKQAAVKKRLQRIAEGKESARYPMLYTDNSV*