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berkeley_reactor_200306_planktonic_scaffold_44244_211

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(285715..286482)

Top 3 Functional Annotations

Value Algorithm Source
LytTR family two component transcriptional regulator n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CKR3_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 252.0
  • Bit_score: 280
  • Evalue 1.20e-72
Uncharacterized protein {ECO:0000313|EMBL:ETZ20473.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 255.0
  • Bit_score: 360
  • Evalue 1.70e-96
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 253.0
  • Bit_score: 275
  • Evalue 1.50e-71

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 768
ATGAGCACCCTGAAACATATCCTGATCCTGGAAGACGAGCCGCTGAATGCAGCACGGCTACAACGGCTGTTGCTCAAAATAAGGCCAGACCTGAAGATTATGGATGTACTGCCCAGTGTAAAAAAAGCAGTGGACTGGCTTTCCGTTCATCCAAGCCCCGACCTGGTCATTATGGACATCCGCCTGGCCGATGGTTTAAGCTTTGAAGTCTTTAAGCTGGCGGAGCTCAGCTGCCCGGTAATGTTCACGACCGCCTTCGACGAATACGCCATACAGGCCTTTAAATACAACAGTATCGACTATCTGCTTAAGCCTGTAGAACAGGAAGAGCTGGAGGCCGCGATACGTAAACTCGAAAATACGGCGCAACCGTTGCAACCGCAATATACCCTGATCGAAGAGCTGATGGAACAGATCCGGCCAAAGCCTTACCGGACAAGGTTTTTACTACCCTACCGCGACGAGTACCTAAAAATAGACATCGCAGACATCGCCTTCTTTTACTCGCATACCGCCATTACCCATGCCCGGCTCTTTAACGGGAAGCAGATGGTAATACCACATACGTTGGAAACCCTGGAGCAGGAACTCGAACCCAGGGATTTCTTCCGGGTCAACCGGCAGTACATCGTTCATGCCGGCGCCATCGACAAGGTGCACAACTTCTTTAACGGGAAACTAAAACTGGATGTAAAAAACAGCCCCGATCACGAGGTGCTCGTGAGCCGTACAAAGGCCGCTTCGTTTAAAACCTGGCTGGGATATTGA
PROTEIN sequence
Length: 256
MSTLKHILILEDEPLNAARLQRLLLKIRPDLKIMDVLPSVKKAVDWLSVHPSPDLVIMDIRLADGLSFEVFKLAELSCPVMFTTAFDEYAIQAFKYNSIDYLLKPVEQEELEAAIRKLENTAQPLQPQYTLIEELMEQIRPKPYRTRFLLPYRDEYLKIDIADIAFFYSHTAITHARLFNGKQMVIPHTLETLEQELEPRDFFRVNRQYIVHAGAIDKVHNFFNGKLKLDVKNSPDHEVLVSRTKAASFKTWLGY*