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berkeley_reactor_200306_planktonic_scaffold_44244_78

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(73955..74824)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003792BA4 similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 260.0
  • Bit_score: 268
  • Evalue 5.50e-69
DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 268.0
  • Bit_score: 260
  • Evalue 3.30e-67
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 268.0
  • Bit_score: 260
  • Evalue 1.60e-66

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGCGATCAATATGGACGGGCTCGGTAGCCTTCGGACTGGTAAACATCCCCATCAAACTCTATGCTGCGGTACAGGACCGCGCGCTGGATTTCGATATGCTGGATAAAAAAGACCTGGCCCGTATCCACTTTAAAAGAGTAAACGCCGATACCGGTAAGGAAGTGGCCTGGGGCAATATCGTAAAGGGCTATAACCTTAACGGCAAATACGTAGTGCTTACCGACAAAGACTTTGAAAGCGCCAGCCCGGAAAAAACAAAGACCATCGACCTGAGCCTTTTTGTCGATATCAAAGAAGTCGATGTAATCTTATACGATAACGCCTATTACCTGGCGCCTGCCAAGGGCGGCGAAAGAGCCTTCGCCCTGCTGGAGGAGGCGCTGAATAAAGCGGGCATGGCCGGCGTAGGCACCTTTGTATTAAGAAACAAGGAGAAGCCGGTCCTGGTACGCTCGGCACACGGCTTACTGATCCTGCATACCCTGCGCTTCCTGAACGAGATCCGCGACCCTTCAGACTTTACCGTAAAAACACCTGCGCCCAAAAAGAATGAACTGACCATGGCCAGGTCACTCATACAATCTATGCAGTCGGGCTTTAATATCGCTGATTTCAAAGACGGGTATACTGCCAAACTCATGAAACTGATCAGGGCCAAAGCTACCGGTAAGAAGCTGCCAGCGCCCAAAGTAAGCGTGCCTCAATACGCCGACGACCTGATCGGGCAACTGCAGCAAAGTCTTGCCCAACCGGCAAAGAGCACAAAGTCGGTAAAGACAGCAAAGACCTCAAAGGCTTCCGCGGCGACCAAAGCGCCGGCAAAAAAGAAGGCTGCATCCAAAACAAAAGTTAAAAAGAAGGCGGGTTGA
PROTEIN sequence
Length: 290
MRSIWTGSVAFGLVNIPIKLYAAVQDRALDFDMLDKKDLARIHFKRVNADTGKEVAWGNIVKGYNLNGKYVVLTDKDFESASPEKTKTIDLSLFVDIKEVDVILYDNAYYLAPAKGGERAFALLEEALNKAGMAGVGTFVLRNKEKPVLVRSAHGLLILHTLRFLNEIRDPSDFTVKTPAPKKNELTMARSLIQSMQSGFNIADFKDGYTAKLMKLIRAKATGKKLPAPKVSVPQYADDLIGQLQQSLAQPAKSTKSVKTAKTSKASAATKAPAKKKAASKTKVKKKAG*