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berkeley_reactor_200306_planktonic_scaffold_44244_92

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 90401..91315

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE69_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 304.0
  • Bit_score: 451
  • Evalue 4.80e-124
Contig127, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74884.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 304.0
  • Bit_score: 467
  • Evalue 9.20e-129
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 304.0
  • Bit_score: 451
  • Evalue 1.40e-124

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 915
ATGAAAAAGGAAGAGCATATCCCGCATGCATTTCATACCATCGCCGACCTGCACCGTATGCTGGGCTTACCCGCACCGTTGCATCCGCTGGTAAGCCTGGTAGACAATACGAAGATCTCGGTGGGTAAGGAGCAACTGCCGGCATCGTTCCTGCTTAATTTCTACAAGATCTCGTATAAAACGGGGCTGCGGGGGAAGATCAGGTACGGACAGAGTTATTACGACTTCGAAGAAGGCGGTATGACCTTTACGGCTCCGAATCAGTTGCTGGCCACTGAAGATGATACGGAATACCAGGGCTATACCTTGCTGATCCATCCCGATTTTATCCGCAATTACCCGTTGGGCAAAGAGATCCGCAACTATGGCTTCTTTTCTTATGCGATCAACGAAGCCTTACATCTTTCCGAACGCGAGAGGGAGATCATACTCGGTATCTTCAATAATATCCAGGAAGAGTTGAGACAACCTATCGACGATTTCAGCCAGGATGTGATCGTCACGCAAACCGAGCTGATCCTCAATTACAGCAACCGTTTTTACAGGCGGCAGTTCAATACACGCAAAGCGGCCAACCACGATGTGTTGGTACAACTGGAAACCTTGCTGGATCGTTATTTTAACGAAGAGAGCGGTTTGATGAAGGGCTTGCCTACCGTGCAGTATGTGGCTGCGGAGCTTTGTGTATCGCCGCATTACCTGAGCGATATGCTGCGTACGCTTACCGGGCAGAATGCACAGCAGCATATACACAACAAACTGATTGAAAAGGCGAAGGAGATCCTGTCGGTCAGTAACCTGTCGGTCGCTGAAATAGCCTACCAGTTGGGCTTTGAGCATCCCCAGTCCTTCAATAAGTTGTTTAAGCGTAAGACCAGCTTATCGCCGCTGCAGTTCCGGCAATCCTTTAATTAA
PROTEIN sequence
Length: 305
MKKEEHIPHAFHTIADLHRMLGLPAPLHPLVSLVDNTKISVGKEQLPASFLLNFYKISYKTGLRGKIRYGQSYYDFEEGGMTFTAPNQLLATEDDTEYQGYTLLIHPDFIRNYPLGKEIRNYGFFSYAINEALHLSEREREIILGIFNNIQEELRQPIDDFSQDVIVTQTELILNYSNRFYRRQFNTRKAANHDVLVQLETLLDRYFNEESGLMKGLPTVQYVAAELCVSPHYLSDMLRTLTGQNAQQHIHNKLIEKAKEILSVSNLSVAEIAYQLGFEHPQSFNKLFKRKTSLSPLQFRQSFN*