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berkeley_reactor_200306_planktonic_scaffold_44244_99

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(96758..97519)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003746151 similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 255.0
  • Bit_score: 329
  • Evalue 1.80e-87
Uncharacterized protein {ECO:0000313|EMBL:ETZ24120.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 253.0
  • Bit_score: 338
  • Evalue 7.00e-90
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 253.0
  • Bit_score: 301
  • Evalue 1.50e-79

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 762
ATGAATATACTCATCATTGAAGATGAACCCAGGACGGCCAAATCATTGGAAAAAATAATTAAGGAGGTCCGCGCAGATGCGCGGATCACCGGCTTTTGCCAGAGTATCGAAGGCGCTGTTAAGGTACTGGCACAACACCCGCCCATAGACCTTATCTTTATGGACATTCAACTGGCCGATGGCCTGTCGTTCGAGATCTTCAAACAGGTAACCGTTACCTGCCCTGTCGTTTTTTGCACGGCATTCGACGAATACGCGATAGAAGCCTTCCGGCAGAACGGGATTGATTATATCCTCAAACCCTTTTCCCTGGCCGATATTACCGAAGCCTTCAACAAGGCCGATAGCCTGAAGCAATTTTACCAGCAGAAAGCCACGCCCGACTTCAGCGAGCTGATCAGCAGGCTGGGCGCCCCCGCGGGCAAGACCAGCTTCCTGGTCTTCCACGATCAGAAATACATCACCATCGCTACCGACCAGATCGCTTTCTTTTATGTAAGCTATAATGCGACCTGTATTAAATGCTTCGATAAAAAAGAATACGTCATCAGCCAGTCGCTCGACCAAATCGCGGCGCAGGTATCGGCGAAGCAATTCTTCCGCGTAAACCGGCAATACCTGGTCAATTTCAAAGCCATCAAAGAAGTGGAACATTACTTTATGCGCAAGCTGTATGTAAAGCTGGTCATCGATACTAAGGAAAAGTTACTGGTCAATAAAGAGAAGGCGCCACGTTTCTTTGCCTGGATGGAGGAACGCTAA
PROTEIN sequence
Length: 254
MNILIIEDEPRTAKSLEKIIKEVRADARITGFCQSIEGAVKVLAQHPPIDLIFMDIQLADGLSFEIFKQVTVTCPVVFCTAFDEYAIEAFRQNGIDYILKPFSLADITEAFNKADSLKQFYQQKATPDFSELISRLGAPAGKTSFLVFHDQKYITIATDQIAFFYVSYNATCIKCFDKKEYVISQSLDQIAAQVSAKQFFRVNRQYLVNFKAIKEVEHYFMRKLYVKLVIDTKEKLLVNKEKAPRFFAWMEER*