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berkeley_reactor_200306_planktonic_scaffold_44244_107

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(104911..106329)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXW4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 469.0
  • Bit_score: 585
  • Evalue 4.40e-164
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:KGE13328.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 472.0
  • Bit_score: 594
  • Evalue 1.30e-166
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 467.0
  • Bit_score: 577
  • Evalue 2.00e-162

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1419
ATGAAAAAAATAAGTCTTAATATACGCACCCTCGCTGCGCTGAGCCTGCTCCTGCCGGCCTGTAGCGTAGGCCGGAAATACAGCCGCACCGAATTGGAGCTGCCGGCGCAGTACCGGCAACAGTTGCCGCTTACCGCCGATACGGTATCCCTGCCCTGGAAGGCCTTTTTTAAAGATCCGCAATTGGTAGCGCTGGTACATAAAGCGCTGGAGAAAAATACCGATATCCGGGTAGCCATGCTGAGCCTGCGGCAAACCGAGTTAAGTTACAAACAAGCCAAACTCCAGTTATTACCCTCGGTCGATCTTACCGCGGGCACTAACCGGAACTGGCTGTCGCAAAACTCGCTGAATGGTTCGCTGAGCCAGCAATTTGCCGGCACCAATTATATGGACGACTTTAATGCCGCCATCAACCTATCGTGGGAAGCTGATATTTGGGGTAAAGCCAAAATGCAAAAAGAAGAAGCCCGGGCCAATTACTTTATGCAAAAGGAAAACCTGGACGCCTTACGCACGCGGATCATTGCCGAAGTAGCGCAGGCCTATTACAACCTGGTATCGCTCGATGAGCAACTCCGGGTTGCCGTTCAGAACACCGACCTGAGCGAAAACACCCTGCAGATGATCCGCCTGCAATACCGTTCGGCGCAAGCCAGCTCGGTAGCTGTGGAGCAGGCTGAAGCACAGAAGAAAACCGCGGAACTGCTGATCCCGCTGGCCAAACAGAACATTGCCATCCAGGAAAATGCGATCAGCATTTTATGCGGGGTATATCCCGATAGTATCGGCAGGGCTGCCAGTCTTGACCAGGCTATGCCCGAAGCCGTGTTTGCTACCGGCGTGCCGGCGGTATTGCTGAGCCGCAGACCCGATGTTAAGGCCGCAGAATATGCAGTAATGGCAGCCAACTCCCGGAGTGGCCTGGCCAAAGCCAATATGTACCCTTCTTTTACGCTTACGGCATCGGCCGGGGCCAACTCTTTTAAGTTCAGCAACTGGTTCGACCTGCCGGGATCGTTGGTTAAAAATCTGGGCGTAGGTCTTACGCAACCGGTGTTCCGTAAGCGCGCGCTGAAAACGGCCTATGATGTTGCCTTGCTGGAACAGGAAAAATCGGCGCAGCAGTTCCGGCAAACCGTGCTGGTAGCCGTGGGTGAAGTATCGGATGCCTTGGCCACCCTGGCGCATAGCGACGCGCGTTTGTCTTTAACCGCATCGAAAGGACAATCGCTGGGTAATGCCACGCGCGATGCAACAGCCTTGTACAAAAGCGCTATGGCCAGTTACCTCGAAGTAATCACGGCACAAAACAATGCGTTGCAAAACGACCTGGATGCCATTGCCATCAAACGCGAAAAGATGCAGGCCCTTACCAAATTGTACCGGGCATTGGGTGGCGGTACGGATGCACGGTAA
PROTEIN sequence
Length: 473
MKKISLNIRTLAALSLLLPACSVGRKYSRTELELPAQYRQQLPLTADTVSLPWKAFFKDPQLVALVHKALEKNTDIRVAMLSLRQTELSYKQAKLQLLPSVDLTAGTNRNWLSQNSLNGSLSQQFAGTNYMDDFNAAINLSWEADIWGKAKMQKEEARANYFMQKENLDALRTRIIAEVAQAYYNLVSLDEQLRVAVQNTDLSENTLQMIRLQYRSAQASSVAVEQAEAQKKTAELLIPLAKQNIAIQENAISILCGVYPDSIGRAASLDQAMPEAVFATGVPAVLLSRRPDVKAAEYAVMAANSRSGLAKANMYPSFTLTASAGANSFKFSNWFDLPGSLVKNLGVGLTQPVFRKRALKTAYDVALLEQEKSAQQFRQTVLVAVGEVSDALATLAHSDARLSLTASKGQSLGNATRDATALYKSAMASYLEVITAQNNALQNDLDAIAIKREKMQALTKLYRALGGGTDAR*