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berkeley_reactor_200306_planktonic_scaffold_44244_109

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(109511..110644)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VP39_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 358.0
  • Bit_score: 447
  • Evalue 8.70e-123
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGE13326.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 359.0
  • Bit_score: 457
  • Evalue 1.20e-125
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 373.0
  • Bit_score: 446
  • Evalue 5.50e-123

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1134
ATGACGACCAGCATCTTTGCGACCAGACAACTCTTTACGACTTCAGCTCTCTTTTTATCCGTATTCCTGGCATCCTGCGGCGGCGCGCCCGGCGGACCGGAGCAGGTACCTGCCGATAAGGTAGACTTTGTAGAGATCGCTCCCGGCGAGGCGCCTATCGAAAAACGGTATCCCGGCGCTATAGAAGGCAGTGTAAACGTAGATATCAAGGCACAGGTAACGGGTTACCTGGAGCAGATCTATGTAAAGGAAGGCGATTATGTAAAAAAAGGCCAGCCCCTGTTTCGCCTGAAAGGCGATGTATACAACGAACAGGTAAGCAACTCCAGGGCTGCATACGAAGCCGCCCAGGCCGCACAACAGAATGCCCGCATCGAAGTGGAAAAAATACGGCCGCTGGTCGAAGGTAAGGTGTACAGCGAACTGCAACTGCAGACCGCCGAATCGAATCTTGCCGCTGCCAAAGCCCAGGTGGCCCAGGCCCGCGCGGCGCTCGGTTCATCGCAGGTTAATGCAGCCTTTACACTCATTACCGCACCGGTAAACGGGTATATAGGCCGTATCCCTAACCGGACCGGCAACCTCGTTACCCCTGCCGATGCCACCCCGCTGACTACCCTTTCGGACATCGAGAAGGTGTATGTCTATTTCTCGCTCAGCGAGTCCGACTTTATCACCTTCCTGAAAGACCGTAAAACAGACGAAGGTATGAATACCGTATCGCTCATCATGGCGGATGGTACCCGGTATGAACAGCCCGGTACGATAGAGCTGGCCAGTGGTAATATAGACCGTGCTACCGGCAGTATGGCGCTGAAAGCCATCTTCCCTAACCCGGATAAAATACTGCGCTCGGGCGGTTCGGGTAAAATCGTGCTGACCCGGCAACAGAGCAATGCCCTGGCCATCCCCATGGGTAGCGTAAAAGATATACAGGACCGCTACTTCGTGTTTGTATTGGGCGCAGGCAATAAGGTAGCCATGAAGCCGGTAGAGCTATCCGGCAAATCGGGCACCCAGTATTATGTCATTAAGTCGGGGTTGCAAGCCGGCGATAAAGTAGCGCTGAACCGTATCGATGCGCTTAACGACGGTACGCCCGTTGTGCCCGCAGTGCGCCATTTTCCGAATTAA
PROTEIN sequence
Length: 378
MTTSIFATRQLFTTSALFLSVFLASCGGAPGGPEQVPADKVDFVEIAPGEAPIEKRYPGAIEGSVNVDIKAQVTGYLEQIYVKEGDYVKKGQPLFRLKGDVYNEQVSNSRAAYEAAQAAQQNARIEVEKIRPLVEGKVYSELQLQTAESNLAAAKAQVAQARAALGSSQVNAAFTLITAPVNGYIGRIPNRTGNLVTPADATPLTTLSDIEKVYVYFSLSESDFITFLKDRKTDEGMNTVSLIMADGTRYEQPGTIELASGNIDRATGSMALKAIFPNPDKILRSGGSGKIVLTRQQSNALAIPMGSVKDIQDRYFVFVLGAGNKVAMKPVELSGKSGTQYYVIKSGLQAGDKVALNRIDALNDGTPVVPAVRHFPN*