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berkeley_reactor_200306_planktonic_scaffold_44244_111

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 112052..112807

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W291_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 251.0
  • Bit_score: 320
  • Evalue 1.40e-84
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:KGE13324.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 252.0
  • Bit_score: 329
  • Evalue 3.20e-87
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 251.0
  • Bit_score: 320
  • Evalue 3.90e-85

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGATCAGGAATATTGTAGTAATCGAAGATGAAAAACTGAATGCCGACCGCTTGATCCGGCTCATCCATGCCGTGCGGCCCCTGGTGGTGATCGATGCGGTGATCGACAGTATTGCCGATGCGGTAGAATGGTTTGCCACGCACCCGCATCCCGATGTGGTGATGATGGATATACGCCTTTCGGATGGTTTGAGTTTCGAAATCTTCGATAAAGCCAGTATCCGTTGCCCGGTAATATTTACCACGGCTTACGATGAATATGCGGTGCGGGCCTTTAAAGTAAACAGCGTGGACTACCTGCTGAAACCCGTAGAACAGGAAGAGTTACGCGTGGCGCTCGATAAACTGGAGACGACCACACCGGCATTGGGCAGCACCTCGCTGGAGGAGTTGAAGCAACTGCTGCAACCCAAAGAGTACCGCAGCCGTTTCCTGCTGCCTTACCGGGATAGTTATAAGTCCTTACTGGTAAATGATATTCTCTATATCTACACCGAACACAAGATCTCGAAAGTAAAGCTGGACAATGGCCAGGAAGAGTGTGTGCCGCAAACCATGGAAGAGCTGGAACAACAACTTAACCCCAAACATTTTTTCAGGGCCAACCGGCAATTCATTATTCATATCGATGCCATCGAACAGGTACATAATTACTTTAATGGTAAACTAAAAGTGGATATCCGTAAGCATCCCGACGTGGAAGTACTGGTAAGTCGCGAGCGAGCGGCGCTTTTTAAAAGTTGGCTTAATTTTTAA
PROTEIN sequence
Length: 252
MIRNIVVIEDEKLNADRLIRLIHAVRPLVVIDAVIDSIADAVEWFATHPHPDVVMMDIRLSDGLSFEIFDKASIRCPVIFTTAYDEYAVRAFKVNSVDYLLKPVEQEELRVALDKLETTTPALGSTSLEELKQLLQPKEYRSRFLLPYRDSYKSLLVNDILYIYTEHKISKVKLDNGQEECVPQTMEELEQQLNPKHFFRANRQFIIHIDAIEQVHNYFNGKLKVDIRKHPDVEVLVSRERAALFKSWLNF*