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berkeley_reactor_200306_planktonic_scaffold_69065_38

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 48114..50033

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide repeat protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G0I0_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 28.2
  • Coverage: 656.0
  • Bit_score: 251
  • Evalue 2.00e-63
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEI91360.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.2
  • Coverage: 656.0
  • Bit_score: 251
  • Evalue 2.80e-63
signal transduction histidine kinase LytS similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 582.0
  • Bit_score: 211
  • Evalue 6.60e-52

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Taxonomy

Sphingobacterium spiritivorum → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1920
ATGAACCATACGTACCGTAAAAAGATGGTAAAGCGGATCTGCTACCTCCTGCCCTTGTTGCTGTTCATAGTACAGGCTTGCCGTACCGATAGCGCGCGCAGACAGGAGCTCAGGGCTTCCGAATCGTCTAACCTGGAAAAGCAATATGAAACGGTGATCAGCGCGATGATCACCAGCCTGTCGGATACTGCAGGGTATAATAAACTGCCCCTGGCACTGGCCAATACCAATTACCGGATCAAGGGCTATATCAGCTTTATCAAAGGTTACCATGCCTATAAAAACAAACAGCCCGATTCGGCGGCTGCTGCATTCGAAACAATACTCAGCCAGGCAAAACCGGATACGGCCCGGGACAAGAGCCTGATCACCCTCAAATACGCAGGACTGACCCGCTTAAAGCTGGACCGGCAAGTCGACTCCTCGACCTTTGCCCTGTTATTTTCCATGCTGGAATTTACCGAACGCTATCCCACACCTTACTCCTGGTGGGCCGAAAACCTGGCCGCAGAAGCCTGGTTCCGCTATGGCGAACTGGACCGCTCGGCATATTATATCCAGCAATCCATGTTACATTATCCCGATCCCGGCAACCTGTCCCAGCGTTCGGTGTTCATGTCCCAGTTTTCGCGGATCGCCTCTACCAAAAACGATTTCAAAAAGGCACTGCAATACGAAGACAGTTCGTATAACGATGCGCTGCAAGCCGGCGATACCCGCAGACTGGCCATCAGCAAGGCGGCACAAGCGGTTTTATACATCCGTCTGGGCCAGACCGAAAAGGGGTATCGCTTGCAAAAAGAAGCCTTCGAAGAGAAGAAAAAGCTGGATATGCTCTCCTTCCAGGAGTATATGAATATGGCTTATACCTATAAAGACCAGAAAGACTATGCCACCTCCAATACCTATGCGCAGCAAGGCTTAAGCGTGGCTATGGAAAACGAAAGCGACGAGAACCTGCGTACCGCCTACGAATGCCTCTATATCAATTTCGAGGGCATGGGTAAAGCCGACAGCGCCATCGAATACCTGAAGGAGGCCTTTAATGCCGAACTGCGCAGCGTTTCCAGGAGACAACAGAAAGAAGTTGCACAATTACAACTCAACCTTGATCTTAAAGAACAGAAACATAAAACCCAGCAACTGGCCAACCAGTACAAAGGACAATCGCTGATACTGCGGCAACAACGCATCCTTATCTTTGCCTTTGCCGTGCTGCTGGTACTGGCCATAGTATTGGCTTTCGTTCTGATCCGGCAACGCCGCTTACGCGCCCTCAACGAAAGTATGGAGCTGGAGCAACGGCTGCTGCGCAGCCAGATGGACCCGCACTTTATCTTCAATACCCTGTCCGTACTACAAAGCTTTATCCGCAGCAACGACAACGAACGGTCCATCAAATACCTGAGCCAGTTTGCCCGCCTGTTACGCGTAAGCCTTGAAAACTCGCGGGAGGCTTTCGTACCGCTGCGCCAGGAGATAGAAGCCCTGGAGAACTACCTGAGCCTGCAGGCCATGCGTTTCGAAGGCGTGTTCGAATACCGGGTAACCGGTTATGAAGGATATGAAGAAGATGAGGAAGTAATGATACCGCCCATGCTGATACAACCTTTCGTTGAAAACGCCATCCAGTACGGCATTCAGAACCTCGACACCAAAGGCGAACTGCTGATCAGGATCGATAAGGAAGATGGTATGATCCTTTGCCGGATCGACGATAACGGTCATGGTATCGGCAAAGTGGCAACAGGCAACCCGGGCAAGCAATCGCTATCGACACATATTACCCGCGAACGGCTGAATATACTGAGCCGCCGCACCGGCCGTACAGCCAACCTGGAAATCCTGAACAAGGCCGATGCAGGCATAGGCCAAGGCACGCTGGTAAAACTGGCTATCCCTTTTATCAAGGCCAGCTAA
PROTEIN sequence
Length: 640
MNHTYRKKMVKRICYLLPLLLFIVQACRTDSARRQELRASESSNLEKQYETVISAMITSLSDTAGYNKLPLALANTNYRIKGYISFIKGYHAYKNKQPDSAAAAFETILSQAKPDTARDKSLITLKYAGLTRLKLDRQVDSSTFALLFSMLEFTERYPTPYSWWAENLAAEAWFRYGELDRSAYYIQQSMLHYPDPGNLSQRSVFMSQFSRIASTKNDFKKALQYEDSSYNDALQAGDTRRLAISKAAQAVLYIRLGQTEKGYRLQKEAFEEKKKLDMLSFQEYMNMAYTYKDQKDYATSNTYAQQGLSVAMENESDENLRTAYECLYINFEGMGKADSAIEYLKEAFNAELRSVSRRQQKEVAQLQLNLDLKEQKHKTQQLANQYKGQSLILRQQRILIFAFAVLLVLAIVLAFVLIRQRRLRALNESMELEQRLLRSQMDPHFIFNTLSVLQSFIRSNDNERSIKYLSQFARLLRVSLENSREAFVPLRQEIEALENYLSLQAMRFEGVFEYRVTGYEGYEEDEEVMIPPMLIQPFVENAIQYGIQNLDTKGELLIRIDKEDGMILCRIDDNGHGIGKVATGNPGKQSLSTHITRERLNILSRRTGRTANLEILNKADAGIGQGTLVKLAIPFIKAS*